Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63053 | Canola | nucleus | 99.64 | 84.26 |
| Bra017533.1-P | Field mustard | nucleus | 82.48 | 78.2 |
| AT5G46690.1 | Thale cress | nucleus | 85.4 | 71.56 |
| HORVU2Hr1G106030.2 | Barley | cytosol, mitochondrion, nucleus | 21.17 | 56.31 |
| GSMUA_Achr11P... | Banana | mitochondrion | 31.39 | 45.5 |
| Bra040856.1-P | Field mustard | nucleus | 35.04 | 44.24 |
| KRH75598 | Soybean | nucleus | 45.99 | 41.58 |
| KRH45428 | Soybean | nucleus | 45.26 | 40.92 |
| Solyc08g076820.2.1 | Tomato | nucleus | 48.54 | 40.55 |
| PGSC0003DMT400045210 | Potato | nucleus | 48.54 | 40.3 |
| VIT_02s0012g01450.t01 | Wine grape | nucleus | 45.99 | 40.0 |
| GSMUA_Achr11P... | Banana | nucleus | 39.78 | 36.33 |
| Bra016377.1-P | Field mustard | nucleus | 36.86 | 33.44 |
| Bra012329.1-P | Field mustard | nucleus | 36.5 | 33.0 |
| Bra027958.1-P | Field mustard | nucleus | 34.67 | 32.53 |
| Bra016080.1-P | Field mustard | nucleus | 37.59 | 31.69 |
| Bra008017.1-P | Field mustard | nucleus | 37.23 | 31.29 |
| TraesCS2A01G448800.1 | Wheat | nucleus | 37.59 | 31.12 |
| TraesCS6A01G264200.1 | Wheat | nucleus | 37.96 | 30.95 |
| TraesCS2B01G469800.1 | Wheat | nucleus | 36.86 | 30.89 |
| TraesCS2B01G469700.1 | Wheat | nucleus | 36.86 | 30.89 |
| Bra003886.1-P | Field mustard | nucleus | 36.5 | 30.86 |
| Zm00001d051509_P001 | Maize | nucleus | 37.23 | 30.72 |
| TraesCS6B01G291200.1 | Wheat | nucleus | 37.59 | 30.65 |
| TraesCS2D01G448000.1 | Wheat | nucleus | 36.86 | 30.51 |
| TraesCS6D01G250700.1 | Wheat | nucleus | 38.32 | 30.26 |
| HORVU6Hr1G067000.2 | Barley | nucleus | 37.96 | 29.97 |
| Bra031865.1-P | Field mustard | nucleus | 23.36 | 29.36 |
| EES07423 | Sorghum | nucleus | 37.23 | 29.23 |
| Zm00001d002492_P001 | Maize | mitochondrion | 18.61 | 28.98 |
| Zm00001d026046_P001 | Maize | nucleus | 35.4 | 28.87 |
| KXG27015 | Sorghum | cytosol | 35.4 | 28.28 |
| Bra004505.1-P | Field mustard | nucleus | 27.74 | 28.04 |
| Bra037414.1-P | Field mustard | nucleus | 31.75 | 27.97 |
| Bra007644.1-P | Field mustard | nucleus | 28.47 | 27.96 |
| Bra040234.1-P | Field mustard | nucleus | 20.07 | 27.36 |
| Bra020775.1-P | Field mustard | nucleus | 20.07 | 27.36 |
| Os02t0691500-01 | Rice | nucleus | 37.23 | 27.35 |
| Zm00001d017677_P001 | Maize | nucleus | 35.77 | 26.78 |
| Bra001183.1-P | Field mustard | nucleus | 20.07 | 26.57 |
| Bra040483.1-P | Field mustard | nucleus | 28.47 | 24.53 |
| KXG27016 | Sorghum | cytosol, nucleus, plastid | 29.56 | 23.41 |
| Bra028357.1-P | Field mustard | nucleus | 33.94 | 23.25 |
| Bra001929.1-P | Field mustard | nucleus | 33.94 | 22.96 |
| Bra028351.1-P | Field mustard | nucleus | 29.93 | 22.78 |
| Bra029088.1-P | Field mustard | nucleus | 26.28 | 21.43 |
| Bra022638.1-P | Field mustard | nucleus | 25.55 | 20.0 |
| Bra003073.1-P | Field mustard | nucleus | 27.74 | 17.55 |
Protein Annotations
| EnsemblPlants:Bra025007.1 | EnsemblPlants:Bra025007.1-P | EnsemblPlantsGene:Bra025007 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF31 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000253FB76 | UniProt:M4E8A1 | MapMan:15.5.32 | : | : |
Description
AT5G46690 (E=5e-082) bHLH071 | bHLH071 (beta HLH protein 71); DNA binding / transcription factor
Coordinates
chrA06:-:24652077..24653107
Molecular Weight (calculated)
30688.6 Da
IEP (calculated)
9.188
GRAVY (calculated)
-0.501
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLEALSSNG LLNFLLSESL SPTPFKSLLD LEPAPENDII IIPKNTIPEM SQQEPASRQP PPASRGKKRR RRKPRVCKNE EEAENQRITH IAVERNRRRQ
101: MNQHLSVLRS LMPQPFSQKG DQASIVGGAI DFIKELEHQL LSLEVQKLQK DKLSQTVTSS TSQDSNCEPE NPHLSLSQFF LHSYDPSQEN RNGSTSSVKT
201: AMEDLEVTLI ETHANIRILS RRRGFQWTSV VATTGPPQLS KLVAALQSLS LSVLHLSVTT LETFAIYSIS TKVN
101: MNQHLSVLRS LMPQPFSQKG DQASIVGGAI DFIKELEHQL LSLEVQKLQK DKLSQTVTSS TSQDSNCEPE NPHLSLSQFF LHSYDPSQEN RNGSTSSVKT
201: AMEDLEVTLI ETHANIRILS RRRGFQWTSV VATTGPPQLS KLVAALQSLS LSVLHLSVTT LETFAIYSIS TKVN
001: MTLEALSSNG LLNFLLSETL SPTPFKSLVD LEPLPENDVI ISKNTISEIS NQEPPPQRQP PATNRGKKRR RRKPRVCKNE EEAENQRMTH IAVERNRRRQ
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVIKLK PYHLNRTKPD
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVIKLK PYHLNRTKPD
Arabidopsis Description
BHLH71Transcription factor bHLH71 [Source:UniProtKB/Swiss-Prot;Acc:Q56XR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.