Factsheet for Bra037414.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51710	Canola	nucleus	100.0	100.0
AT4G01460.2	Thale cress	nucleus	80.39	79.37
Bra040856.1-P	Field mustard	nucleus	30.23	43.32
Bra004505.1-P	Field mustard	nucleus	37.3	42.8
Bra007644.1-P	Field mustard	nucleus	36.98	41.22
GSMUA_Achr11P...	Banana	nucleus	37.3	40.7
GSMUA_Achr5P20300_001	Banana	nucleus	37.62	40.07
VIT_15s0048g02510.t01	Wine grape	nucleus	46.3	39.89
KRH47774	Soybean	nucleus	48.87	39.58
KRH06347	Soybean	nucleus	48.55	37.94
HORVU4Hr1G084850.2	Barley	extracellular	36.33	37.29
TraesCS4B01G347100.1	Wheat	extracellular	35.69	37.0
Bra040234.1-P	Field mustard	nucleus	23.79	36.82
Os03t0122100-00	Rice	mitochondrion, nucleus, plastid	36.66	36.66
Zm00001d027419_P001	Maize	nucleus	36.66	36.66
TraesCS5A01G515800.1	Wheat	extracellular	35.69	36.63
Bra040483.1-P	Field mustard	nucleus	37.3	36.48
Bra020775.1-P	Field mustard	nucleus	23.47	36.32
TraesCS4D01G342000.1	Wheat	extracellular	35.37	36.3
GSMUA_Achr11P...	Banana	nucleus	38.26	36.06
Zm00001d048478_P001	Maize	nucleus	37.3	35.8
Bra001183.1-P	Field mustard	nucleus	23.79	35.75
OQU93358	Sorghum	nucleus	36.33	34.98
Bra012329.1-P	Field mustard	nucleus	31.51	32.34
GSMUA_Achr8P12330_001	Banana	golgi, vacuole	37.94	32.24
Bra016377.1-P	Field mustard	nucleus	30.87	31.79
Bra025007.1-P	Field mustard	nucleus	27.97	31.75
Bra016080.1-P	Field mustard	nucleus	33.12	31.69
Bra031865.1-P	Field mustard	nucleus	22.19	31.65
Bra008017.1-P	Field mustard	nucleus	32.48	30.98
Bra003886.1-P	Field mustard	nucleus	32.15	30.86
Bra017533.1-P	Field mustard	nucleus	28.62	30.8
Bra027958.1-P	Field mustard	nucleus	27.65	29.45
Bra028357.1-P	Field mustard	nucleus	32.15	25.0
Bra001929.1-P	Field mustard	nucleus	31.83	24.44
Bra029088.1-P	Field mustard	nucleus	24.76	22.92
Bra028351.1-P	Field mustard	nucleus	25.72	22.22
Bra022638.1-P	Field mustard	nucleus	23.79	21.14
Bra003073.1-P	Field mustard	nucleus	25.08	18.01

Protein Annotations

EnsemblPlants:Bra037414.1	EnsemblPlants:Bra037414.1-P	EnsemblPlantsGene:Bra037414	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
ncoils:Coil	PANTHER:PTHR11969	PANTHER:PTHR11969:SF29	PFAM:PF00010	PFscan:PS50888	SEG:seg
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0002542082	UniProt:M4F8K2	MapMan:15.5.32	:

Description

AT4G01460 (E=4e-100) | basic helix-loop-helix (bHLH) family protein

Coordinates

chrA09:-:633451..634855

Molecular Weight (calculated)

34838.4 Da

IEP (calculated)

6.412

GRAVY (calculated)

-0.537

Length

311 amino acids

Sequence
(BLAST)

001: MEGLMRFGGL EEQFSHISEN AINEKTPFLQ MLQCIEPEPN QILQSLLQSQ TLEPESCLTL ETIKRDPGLE EDPVKDPKIE DGAEAKVKEK RKRKRTRAPK
101: NKDEVESQRM THIAVERNRR RQMNEHLNSL RSLMPPTFLQ RGDQASIVGG AIDYIKELEQ LLQSLEAEKH SEGASENPKA ASSYSSSSSR ACTNSSVSSI
201: SPTSEDGFTA RFGGGETAEV EATVIQNHVS LKVRCKRGRG QILRAIISIE NLKLSILHLT ISTSFDFVFY SFNLKIEEGC KVRSADEIAT AVHQIFEQIN
301: GVMMWSNLSR A

Best Arabidopsis Sequence Match ( AT4G01460.2 )
(BLAST)

001: MSGLMSFGEL EDQFGQISDT TMEEKIPFLQ MLQCIEHPFT TTEPNQFLQS LLQIQTLESK SCLTLETNIK RDPGQTDDPE KDPRTENGAV TVKEKRKRKR
101: TRAPKNKDEV ENQRMTHIAV ERNRRRQMNE HLNSLRSLMP PSFLQRGDQA SIVGGAIDFI KELEQLLQSL EAEKRKDGTD ETPKTASCSS SSSLACTNSS
201: ISSVSTTSEN GFTARFGGGD TTEVEATVIQ NHVSLKVRCK RGKRQILKAI VSIEELKLAI LHLTISSSFD FVIYSFNLKM EDGCKLGSAD EIATAVHQIF
301: EQINGEVMWS NLSRT

Arabidopsis Description

BHLH57Transcription factor bHLH57 [Source:UniProtKB/Swiss-Prot;Acc:Q9M128]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.