Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G347100.1 | Wheat | extracellular | 77.81 | 80.67 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 78.46 | 80.53 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 78.14 | 80.2 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 78.14 | 80.2 |
| Zm00001d027419_P001 | Maize | nucleus | 77.49 | 77.49 |
| OQU93358 | Sorghum | nucleus | 78.14 | 75.23 |
| Zm00001d048478_P001 | Maize | nucleus | 72.03 | 69.14 |
| GSMUA_Achr11P... | Banana | nucleus | 41.48 | 45.26 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 41.8 | 44.52 |
| GSMUA_Achr11P... | Banana | nucleus | 45.98 | 43.33 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 45.34 | 38.52 |
| Bra037414.1-P | Field mustard | nucleus | 36.66 | 36.66 |
| CDY51710 | Canola | nucleus | 36.66 | 36.66 |
| CDY07143 | Canola | nucleus | 36.01 | 36.13 |
| Bra004505.1-P | Field mustard | nucleus | 30.87 | 35.42 |
| AT4G01460.2 | Thale cress | nucleus | 35.05 | 34.6 |
| CDY27521 | Canola | nucleus | 33.44 | 33.55 |
| CDY11386 | Canola | nucleus | 29.9 | 33.33 |
| Bra007644.1-P | Field mustard | nucleus | 29.58 | 32.97 |
| Os02t0759000-01 | Rice | cytosol | 16.08 | 32.89 |
| Os05t0597000-00 | Rice | nucleus | 23.79 | 32.6 |
| CDX80049 | Canola | nucleus | 32.15 | 31.95 |
| CDY48013 | Canola | nucleus | 32.48 | 31.76 |
| Bra040483.1-P | Field mustard | nucleus | 32.48 | 31.76 |
| CDY41561 | Canola | nucleus | 31.83 | 31.73 |
| CDY68483 | Canola | nucleus | 32.48 | 31.56 |
| CDX76598 | Canola | nucleus | 31.51 | 31.11 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 35.69 | 30.75 |
| KRH47774 | Soybean | nucleus | 37.62 | 30.47 |
| CDY55926 | Canola | nucleus | 31.51 | 30.34 |
| KRH06347 | Soybean | nucleus | 37.3 | 29.15 |
| Os10t0376900-01 | Rice | nucleus | 30.55 | 28.96 |
| Os03t0188400-01 | Rice | nucleus | 30.55 | 28.88 |
| Os09t0468700-00 | Rice | nucleus | 32.48 | 28.77 |
| AT2G46810.1 | Thale cress | nucleus | 34.08 | 28.57 |
| CDY55929 | Canola | nucleus | 30.55 | 28.44 |
| AT3G61950.1 | Thale cress | nucleus | 32.15 | 27.93 |
| Os08t0483900-01 | Rice | nucleus | 29.58 | 25.34 |
| Os02t0691500-01 | Rice | nucleus | 29.9 | 24.93 |
| Os05t0586300-00 | Rice | nucleus | 25.72 | 20.67 |
| Os02t0257500-00 | Rice | nucleus | 22.19 | 16.63 |
| Os06t0526100-01 | Rice | cytosol, endoplasmic reticulum, nucleus | 20.26 | 15.95 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A0N7KGH6 | ProteinID:BAS82041.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlantsGene:Os03g0122100 |
| EnsemblPlants:Os03t0122100-00 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF20 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0003938BFE | InterPro:bHLH_dom | SEG:seg | : | : |
Description
basic helix-loop-helix protein 052Similar to Helix-loop-helix DNA-binding domain containing protein. (Os03t0122100-00)
Coordinates
chr3:+:1226308..1229550
Molecular Weight (calculated)
32625.0 Da
IEP (calculated)
8.404
GRAVY (calculated)
-0.098
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MERMQLQGPI GSLWAAAAAA DQAAASAGAG QMPFLALLHG AMEADGGGGG DGRKRHAAAA AFASCCPCPP VADLDLLESC VTQAAAPPVT APATRAERRR
101: KRPRPRPRAA PPPEKRKKPE EAENQRMTHI AVERNRRRLM NDHLASLRSL IPSNYIPRGD QATVVGGAID YVKQLEQQLV ALQAAAAERS GVGVVAAAAT
201: AASDGVFVSP QYTSYSEARG GSGVDVEATA AVGGHVRVRV AGRRWTGRLV RAVAAMEDLR LTVLHLAVTS VGHDAVVYCF NLKMEEGCEM ATADEVATVV
301: HQIFAYAGAC C
101: KRPRPRPRAA PPPEKRKKPE EAENQRMTHI AVERNRRRLM NDHLASLRSL IPSNYIPRGD QATVVGGAID YVKQLEQQLV ALQAAAAERS GVGVVAAAAT
201: AASDGVFVSP QYTSYSEARG GSGVDVEATA AVGGHVRVRV AGRRWTGRLV RAVAAMEDLR LTVLHLAVTS VGHDAVVYCF NLKMEEGCEM ATADEVATVV
301: HQIFAYAGAC C
001: MERSIQGQNK LCCLDQKVNV RRSLQVQETV EDHQSFALEE EEQQLSTPSL LQDTTIPFLQ MLQQSEDPSP FLSFKDPSFL ALLSLQTLEK PWELENYLPH
101: EVPEFHSPIH SETNHYYHNP SLEGVNEAIS NQELPFNPLE NARSRRKRKN NNLASLMTRE KRKRRRTKPT KNIEEIESQR MTHIAVERNR RRQMNVHLNS
201: LRSIIPSSYI QRGDQASIVG GAIDFVKILE QQLQSLEAQK RSQQSDDNKE QIPEDNSLRN ISSNKLRASN KEEQSSKLKI EATVIESHVN LKIQCTRKQG
301: QLLRSIILLE KLRFTVLHLN ITSPTNTSVS YSFNLKMEDE CNLGSADEIT AAIRQIFDS
101: EVPEFHSPIH SETNHYYHNP SLEGVNEAIS NQELPFNPLE NARSRRKRKN NNLASLMTRE KRKRRRTKPT KNIEEIESQR MTHIAVERNR RRQMNVHLNS
201: LRSIIPSSYI QRGDQASIVG GAIDFVKILE QQLQSLEAQK RSQQSDDNKE QIPEDNSLRN ISSNKLRASN KEEQSSKLKI EATVIESHVN LKIQCTRKQG
301: QLLRSIILLE KLRFTVLHLN ITSPTNTSVS YSFNLKMEDE CNLGSADEIT AAIRQIFDS
Arabidopsis Description
BHLH70Transcription factor bHLH70 [Source:UniProtKB/Swiss-Prot;Acc:O81037]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.