Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51710 | Canola | nucleus | 96.45 | 96.14 |
| AT4G01460.2 | Thale cress | nucleus | 80.97 | 79.68 |
| CDY11386 | Canola | nucleus | 37.1 | 41.22 |
| CDY37634 | Canola | nucleus | 29.68 | 40.35 |
| GSMUA_Achr11P... | Banana | nucleus | 36.77 | 40.0 |
| CDY68483 | Canola | nucleus | 41.29 | 40.0 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 37.1 | 39.38 |
| CDY55926 | Canola | nucleus | 40.97 | 39.32 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 45.48 | 39.06 |
| KRH47774 | Soybean | nucleus | 47.1 | 38.02 |
| CDY41561 | Canola | nucleus | 37.74 | 37.5 |
| CDX76598 | Canola | nucleus | 37.74 | 37.14 |
| CDX80049 | Canola | nucleus | 37.42 | 37.06 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 36.13 | 36.96 |
| KRH06347 | Soybean | nucleus | 47.1 | 36.68 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 35.48 | 36.67 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 35.81 | 36.63 |
| CDY27521 | Canola | nucleus | 36.45 | 36.45 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 36.13 | 36.01 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 35.16 | 35.97 |
| CDY48013 | Canola | nucleus | 36.77 | 35.85 |
| Zm00001d027419_P001 | Maize | nucleus | 35.81 | 35.69 |
| CDY18843 | Canola | nucleus | 22.9 | 35.32 |
| Zm00001d048478_P001 | Maize | nucleus | 36.77 | 35.19 |
| GSMUA_Achr11P... | Banana | nucleus | 37.42 | 35.15 |
| CDY55929 | Canola | nucleus | 37.74 | 35.03 |
| CDY24717 | Canola | nucleus | 22.58 | 34.83 |
| CDY05233 | Canola | nucleus | 22.9 | 34.8 |
| OQU93358 | Sorghum | nucleus | 35.81 | 34.37 |
| CDY08066 | Canola | nucleus | 22.9 | 34.3 |
| CDY58338 | Canola | nucleus | 22.9 | 34.3 |
| CDY04811 | Canola | nucleus | 31.94 | 32.89 |
| CDY21365 | Canola | nucleus | 31.61 | 32.56 |
| CDY41479 | Canola | nucleus | 29.68 | 32.17 |
| CDY12528 | Canola | nucleus | 29.03 | 31.91 |
| CDX91680 | Canola | nucleus | 29.35 | 31.82 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 37.42 | 31.69 |
| CDY03201 | Canola | cytosol | 18.06 | 30.94 |
| CDY37820 | Canola | nucleus | 21.29 | 30.28 |
| CDX77682 | Canola | nucleus | 31.61 | 30.25 |
| CDY65719 | Canola | nucleus | 29.35 | 30.23 |
| CDX96382 | Canola | nucleus | 31.61 | 30.15 |
| CDY46652 | Canola | nucleus | 27.42 | 30.14 |
| CDY50447 | Canola | nucleus | 31.29 | 29.94 |
| CDX68274 | Canola | nucleus | 31.29 | 29.94 |
| CDY63053 | Canola | nucleus | 31.29 | 29.94 |
| CDY41734 | Canola | nucleus | 29.03 | 29.9 |
| CDX72877 | Canola | nucleus | 31.61 | 29.88 |
| CDY03650 | Canola | nucleus | 31.29 | 29.75 |
| CDY35175 | Canola | nucleus | 28.06 | 29.59 |
| CDX82171 | Canola | nucleus | 30.97 | 29.45 |
| CDY33966 | Canola | nucleus | 26.45 | 27.15 |
| CDY47059 | Canola | nucleus | 26.77 | 23.78 |
| CDX85167 | Canola | nucleus | 29.68 | 23.65 |
| CDX92996 | Canola | nucleus | 30.65 | 23.46 |
| CDY14397 | Canola | nucleus | 26.77 | 23.38 |
| CDY19692 | Canola | nucleus | 26.45 | 23.23 |
| CDY38734 | Canola | nucleus | 26.45 | 23.23 |
| CDX77460 | Canola | nucleus | 26.45 | 23.03 |
| CDX94841 | Canola | nucleus | 30.0 | 22.79 |
| CDX96201 | Canola | nucleus | 23.87 | 21.02 |
| CDY18083 | Canola | nucleus | 25.48 | 20.57 |
| CDY64587 | Canola | nucleus | 24.52 | 20.49 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078F655 | EnsemblPlants:CDY07143 | ProteinID:CDY07143 | ProteinID:CDY07143.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00123495001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11969 |
| PANTHER:PTHR11969:SF29 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EE2134 | InterPro:bHLH_dom | SEG:seg |
Description
BnaCnng01580D
Coordinates
chrLK031975:-:472350..478305
Molecular Weight (calculated)
34644.1 Da
IEP (calculated)
6.010
GRAVY (calculated)
-0.545
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGLMRFGGL EEQFSHISEN AINEKTPFLQ MLQCIEPEPN QILQSLLQSQ TLEPESCLTL ETIKRDPGQE EDPVKDPKTE DGAEAKVKEK RKRKRTTAPK
101: NNDEVESQRM THIAVERNRR RQMKEHLNSL RSLMPPTFLQ RGDQASIVGG AIDYIKELEQ LLQSLEAEKQ SEGASENPKT ASCSSSSSRA CTNSSVSSIS
201: PASEDGFTAR FGGGETVEVE ATVIQNHVSL KVRCKRGRGQ ILRAIISIEN LKLSILHLTI STSFDFVFYS FNLKIEDGCK VRSADEIATA VHQIFEQING
301: VMMWSNLSRA
101: NNDEVESQRM THIAVERNRR RQMKEHLNSL RSLMPPTFLQ RGDQASIVGG AIDYIKELEQ LLQSLEAEKQ SEGASENPKT ASCSSSSSRA CTNSSVSSIS
201: PASEDGFTAR FGGGETVEVE ATVIQNHVSL KVRCKRGRGQ ILRAIISIEN LKLSILHLTI STSFDFVFYS FNLKIEDGCK VRSADEIATA VHQIFEQING
301: VMMWSNLSRA
001: MSGLMSFGEL EDQFGQISDT TMEEKIPFLQ MLQCIEHPFT TTEPNQFLQS LLQIQTLESK SCLTLETNIK RDPGQTDDPE KDPRTENGAV TVKEKRKRKR
101: TRAPKNKDEV ENQRMTHIAV ERNRRRQMNE HLNSLRSLMP PSFLQRGDQA SIVGGAIDFI KELEQLLQSL EAEKRKDGTD ETPKTASCSS SSSLACTNSS
201: ISSVSTTSEN GFTARFGGGD TTEVEATVIQ NHVSLKVRCK RGKRQILKAI VSIEELKLAI LHLTISSSFD FVIYSFNLKM EDGCKLGSAD EIATAVHQIF
301: EQINGEVMWS NLSRT
101: TRAPKNKDEV ENQRMTHIAV ERNRRRQMNE HLNSLRSLMP PSFLQRGDQA SIVGGAIDFI KELEQLLQSL EAEKRKDGTD ETPKTASCSS SSSLACTNSS
201: ISSVSTTSEN GFTARFGGGD TTEVEATVIQ NHVSLKVRCK RGKRQILKAI VSIEELKLAI LHLTISSSFD FVIYSFNLKM EDGCKLGSAD EIATAVHQIF
301: EQINGEVMWS NLSRT
Arabidopsis Description
BHLH57Transcription factor bHLH57 [Source:UniProtKB/Swiss-Prot;Acc:Q9M128]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.