Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37820 | Canola | nucleus | 63.24 | 87.61 |
| AT5G65320.1 | Thale cress | nucleus | 65.56 | 66.89 |
| GSMUA_Achr3P06660_001 | Banana | mitochondrion, nucleus | 27.48 | 44.62 |
| CDY37634 | Canola | nucleus | 33.44 | 44.3 |
| GSMUA_Achr9P15000_001 | Banana | mitochondrion | 28.48 | 43.22 |
| Os02t0759000-01 | Rice | cytosol | 20.53 | 40.79 |
| Solyc11g010340.1.1 | Tomato | nucleus | 39.07 | 39.6 |
| GSMUA_Achr2P22310_001 | Banana | nucleus | 31.46 | 39.26 |
| GSMUA_Achr10P... | Banana | mitochondrion | 25.5 | 38.89 |
| Zm00001d031260_P001 | Maize | nucleus | 27.48 | 38.43 |
| GSMUA_Achr5P17900_001 | Banana | nucleus | 35.1 | 37.59 |
| CDY41479 | Canola | nucleus | 35.43 | 37.41 |
| VIT_07s0191g00240.t01 | Wine grape | nucleus | 39.74 | 37.27 |
| CDX91680 | Canola | nucleus | 34.44 | 36.36 |
| PGSC0003DMT400041644 | Potato | nucleus | 28.15 | 35.87 |
| GSMUA_Achr6P10290_001 | Banana | nucleus | 33.77 | 35.05 |
| GSMUA_Achr5P05450_001 | Banana | nucleus | 32.78 | 34.49 |
| GSMUA_Achr10P... | Banana | nucleus | 35.1 | 34.3 |
| CDY12528 | Canola | nucleus | 31.79 | 34.04 |
| CDY04811 | Canola | nucleus | 33.77 | 33.89 |
| CDY21365 | Canola | nucleus | 33.77 | 33.89 |
| CDY46652 | Canola | nucleus | 31.13 | 33.33 |
| TraesCS4A01G404700.1 | Wheat | nucleus | 34.11 | 33.23 |
| TraesCS6A01G315700.1 | Wheat | nucleus | 33.77 | 33.22 |
| TraesCS4B01G304500.1 | Wheat | nucleus | 33.77 | 33.01 |
| CDX96382 | Canola | nucleus | 35.43 | 32.92 |
| TraesCS4D01G302700.1 | Wheat | nucleus | 33.77 | 32.9 |
| CDX72877 | Canola | nucleus | 35.43 | 32.62 |
| CDX68274 | Canola | nucleus | 34.44 | 32.1 |
| CDY50447 | Canola | nucleus | 34.44 | 32.1 |
| TraesCS6B01G346100.1 | Wheat | nucleus | 33.77 | 31.97 |
| Zm00001d020790_P001 | Maize | nucleus | 35.1 | 31.93 |
| GSMUA_Achr7P12790_001 | Banana | nucleus | 34.44 | 31.8 |
| TraesCS6D01G294900.1 | Wheat | nucleus | 33.44 | 31.66 |
| GSMUA_Achr8P17650_001 | Banana | nucleus | 30.79 | 31.42 |
| Os10t0376900-01 | Rice | nucleus | 34.11 | 31.4 |
| EER96894 | Sorghum | nucleus | 35.1 | 31.36 |
| Os03t0188400-01 | Rice | nucleus | 34.11 | 31.31 |
| OQU91887 | Sorghum | nucleus | 33.11 | 30.86 |
| GSMUA_Achr6P02150_001 | Banana | nucleus | 35.1 | 30.72 |
| CDY03650 | Canola | nucleus | 33.11 | 30.67 |
| CDX82171 | Canola | nucleus | 33.11 | 30.67 |
| Zm00001d005939_P001 | Maize | nucleus | 33.77 | 30.63 |
| Zm00001d027987_P001 | Maize | nucleus | 33.44 | 30.51 |
| Zm00001d018119_P001 | Maize | nucleus | 35.1 | 30.11 |
| KXG30709 | Sorghum | nucleus | 34.77 | 30.0 |
| Os09t0468700-00 | Rice | nucleus | 34.77 | 29.91 |
| TraesCS6A01G335500.1 | Wheat | nucleus | 34.77 | 29.91 |
| TraesCS6B01G366200.1 | Wheat | nucleus | 34.11 | 29.77 |
| TraesCS5B01G245900.1 | Wheat | nucleus | 33.77 | 29.65 |
| TraesCS5A01G248200.1 | Wheat | nucleus | 33.77 | 29.57 |
| TraesCS6D01G315200.1 | Wheat | nucleus | 33.44 | 29.53 |
| CDY03201 | Canola | cytosol | 17.55 | 29.28 |
| Os08t0483900-01 | Rice | nucleus | 35.1 | 29.2 |
| TraesCS5D01G255100.1 | Wheat | nucleus | 32.45 | 29.17 |
| EER95359 | Sorghum | nucleus | 34.44 | 29.13 |
| Zm00001d048229_P001 | Maize | nucleus | 34.11 | 28.85 |
| Zm00001d052192_P001 | Maize | nucleus | 32.78 | 28.7 |
| CDX77682 | Canola | nucleus | 30.46 | 28.4 |
| CDY11386 | Canola | nucleus | 26.16 | 28.32 |
| CDY65719 | Canola | nucleus | 28.15 | 28.24 |
| CDY63053 | Canola | nucleus | 30.13 | 28.09 |
| CDY41734 | Canola | nucleus | 27.81 | 27.91 |
| HORVU6Hr1G081120.4 | Barley | nucleus | 31.79 | 27.75 |
| CDY24717 | Canola | nucleus | 18.21 | 27.36 |
| CDY51710 | Canola | nucleus | 28.15 | 27.33 |
| CDY35175 | Canola | nucleus | 26.49 | 27.21 |
| CDY05233 | Canola | nucleus | 17.88 | 26.47 |
| CDY07143 | Canola | nucleus | 27.15 | 26.45 |
| CDY18843 | Canola | nucleus | 17.55 | 26.37 |
| CDY27521 | Canola | nucleus | 26.82 | 26.13 |
| CDX76598 | Canola | nucleus | 26.82 | 25.71 |
| CDY08066 | Canola | nucleus | 17.55 | 25.6 |
| CDY58338 | Canola | nucleus | 17.55 | 25.6 |
| CDY41561 | Canola | nucleus | 25.83 | 25.0 |
| CDX80049 | Canola | nucleus | 25.83 | 24.92 |
| CDY48013 | Canola | nucleus | 25.83 | 24.53 |
| CDY68483 | Canola | nucleus | 25.17 | 23.75 |
| CDY55926 | Canola | nucleus | 25.17 | 23.53 |
| HORVU4Hr1G078270.2 | Barley | plastid | 33.77 | 23.08 |
| CDY55929 | Canola | nucleus | 24.17 | 21.86 |
| CDX85167 | Canola | nucleus | 27.48 | 21.34 |
| CDX94841 | Canola | nucleus | 28.48 | 21.08 |
| CDX77460 | Canola | nucleus | 24.83 | 21.07 |
| CDX92996 | Canola | nucleus | 28.15 | 20.99 |
| CDY47059 | Canola | nucleus | 23.84 | 20.63 |
| HORVU5Hr1G070000.3 | Barley | nucleus, plastid | 32.12 | 20.55 |
| CDY38734 | Canola | nucleus | 23.84 | 20.4 |
| CDY19692 | Canola | nucleus | 23.84 | 20.4 |
| CDY14397 | Canola | nucleus | 23.51 | 20.0 |
| CDX96201 | Canola | nucleus | 21.85 | 18.75 |
| CDY18083 | Canola | nucleus | 22.52 | 17.71 |
| CDY64587 | Canola | nucleus | 21.19 | 17.25 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078H807 | UniProt:A0A078H807 | EnsemblPlants:CDY33966 | ProteinID:CDY33966 |
| ProteinID:CDY33966.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00055804001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF49 | SMART:SM00353 | SUPFAM:SSF47459 | SUPFAM:SSF55021 | UniParc:UPI0004EEB7FA |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
BnaC02g43710DBnaC02g43710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H807]
Coordinates
chrLK032325:+:176036..177540
Molecular Weight (calculated)
35021.9 Da
IEP (calculated)
9.809
GRAVY (calculated)
-0.533
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFQHEYPYG FSLMETSSSY EVLDYKMIVG SPPNPISFAS SLATLSSSIA EQQSNSTDNL YSLQARGGFG EEPPRKKRRR RRTRSEQMIE EKENQRMNHI
101: AVERNRRRQM NHFLSILKAM MPLSYSQRVR HQQRLSNFDI FCYTFYYKSD QASIIEGTIN YLKKQEQLLQ SFEAQLKPTK PNQPTNIFSD FFNFPQYSTA
201: IASSRRRHHN GLAVVADVEV TMVEMHANIK VLTKTRPRLL LKMINEFDSL GLTIFHLNLT TSNNMSLFTF SVKVDEACRL TTTANEVADA VHEVVSRIHK
301: EH
101: AVERNRRRQM NHFLSILKAM MPLSYSQRVR HQQRLSNFDI FCYTFYYKSD QASIIEGTIN YLKKQEQLLQ SFEAQLKPTK PNQPTNIFSD FFNFPQYSTA
201: IASSRRRHHN GLAVVADVEV TMVEMHANIK VLTKTRPRLL LKMINEFDSL GLTIFHLNLT TSNNMSLFTF SVKVDEACRL TTTANEVADA VHEVVSRIHK
301: EH
001: MMFQQDYPHG FSLVETSLSY EMLDYFQNIV VSNSEDVASQ QNSISSSSYS SATLSCSITE QKSHLTEKLS PLRERYGCGD FLSRKRRRRS EKTIVDKENQ
101: RMNHIAVERN RRKQMNHFLS ILKSMMPLSY SQPNDQASII EGTISYLKKL EQRLQSLEAQ LKATKLNQSP NIFSDFFMFP QYSTATATAT ATASSSSSSH
201: HHHKRLEVVA DVEVTMVERH ANIKVLTKTQ PRLLFKIINE FNSLGLSTLH LNLTTSKDMS LFTFSVKVEA DCQLTPSGNE VANTVHEVVR RVHKER
101: RMNHIAVERN RRKQMNHFLS ILKSMMPLSY SQPNDQASII EGTISYLKKL EQRLQSLEAQ LKATKLNQSP NIFSDFFMFP QYSTATATAT ATASSSSSSH
201: HHHKRLEVVA DVEVTMVERH ANIKVLTKTQ PRLLFKIINE FNSLGLSTLH LNLTTSKDMS LFTFSVKVEA DCQLTPSGNE VANTVHEVVR RVHKER
Arabidopsis Description
BHLH99Transcription factor bHLH99 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.