Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER96894 | Sorghum | nucleus | 82.28 | 81.07 |
| Zm00001d020790_P001 | Maize | nucleus | 80.48 | 80.72 |
| GSMUA_Achr3P06660_001 | Banana | mitochondrion, nucleus | 35.44 | 63.44 |
| Os09t0468700-00 | Rice | nucleus | 66.67 | 63.25 |
| TraesCS5D01G255100.1 | Wheat | nucleus | 63.06 | 62.5 |
| TraesCS5A01G248200.1 | Wheat | nucleus | 64.56 | 62.32 |
| TraesCS5B01G245900.1 | Wheat | nucleus | 63.96 | 61.92 |
| Zm00001d031260_P001 | Maize | nucleus | 38.14 | 58.8 |
| GSMUA_Achr9P15000_001 | Banana | mitochondrion | 34.83 | 58.29 |
| GSMUA_Achr5P05450_001 | Banana | nucleus | 41.44 | 48.08 |
| VIT_07s0191g00240.t01 | Wine grape | nucleus | 46.25 | 47.83 |
| Solyc11g010340.1.1 | Tomato | nucleus | 40.54 | 45.3 |
| HORVU5Hr1G070000.3 | Barley | nucleus, plastid | 62.76 | 44.28 |
| Zm00001d027987_P001 | Maize | nucleus | 42.94 | 43.2 |
| Zm00001d048229_P001 | Maize | nucleus | 45.35 | 42.3 |
| Zm00001d018119_P001 | Maize | nucleus | 43.54 | 41.19 |
| Zm00001d052192_P001 | Maize | nucleus | 42.64 | 41.16 |
| Zm00001d026046_P001 | Maize | nucleus | 41.14 | 40.77 |
| PGSC0003DMT400041644 | Potato | nucleus | 28.83 | 40.51 |
| Zm00001d051509_P001 | Maize | nucleus | 38.44 | 38.55 |
| Zm00001d009778_P001 | Maize | nucleus | 25.23 | 38.36 |
| Zm00001d002492_P001 | Maize | mitochondrion | 20.12 | 38.07 |
| Zm00001d017677_P001 | Maize | nucleus | 40.54 | 36.89 |
| CDY37820 | Canola | nucleus | 24.02 | 36.7 |
| Bra031865.1-P | Field mustard | nucleus | 23.72 | 36.24 |
| AT5G65320.1 | Thale cress | nucleus | 30.33 | 34.12 |
| CDY33966 | Canola | nucleus | 30.63 | 33.77 |
| Zm00001d027419_P001 | Maize | nucleus | 29.73 | 31.83 |
| Zm00001d048478_P001 | Maize | nucleus | 29.73 | 30.56 |
| Zm00001d009715_P001 | Maize | nucleus | 28.53 | 22.73 |
| Zm00001d046096_P001 | Maize | nucleus | 19.52 | 18.79 |
| Zm00001d053391_P001 | Maize | cytosol, nucleus, plastid | 20.42 | 18.13 |
| Zm00001d016095_P001 | Maize | nucleus | 21.32 | 18.07 |
Protein Annotations
| EntrezGene:100285428 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:B6U4N9 | EMBL:EU972204 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| EMBL:KJ727989 | ProteinID:ONM22389.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF28 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000182E86E | EnsemblPlantsGene:Zm00001d005939 | EnsemblPlants:Zm00001d005939_P001 | EnsemblPlants:Zm00001d005939_T001 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
bHLH-transcription factor 33DNA binding protein
Coordinates
chr2:+:193440250..193442203
Molecular Weight (calculated)
35308.9 Da
IEP (calculated)
7.111
GRAVY (calculated)
-0.253
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEAVVLSQ SQFQQGSRFG CGAMAAGGAW SDLLFSGTEG LFEMGGAAGR GWNAAASSPP QLLQELGDNG AAGSLPVASA GSASGGAGQD APAMAAAAAS
101: GRRKRRRMRP VKNEEEVESQ RMIHIAVERN RRKQMNEHLA ALRSLMPPAH TQRGDQASIV GGAINFVKEL EQLLQSLEAR RRSPQCAAYA VDPDDAGPFA
201: DFLTFPQYSM CAVIAAPENT GHHREGGAVA EQEASGSKPS AVADVEATMV ESHANLRVLS RRRPRQLLRL VLGLQGHRLT VLHLNMSSGA HMVLYSFSLK
301: VEDDCQLTSV GEIAAAAHHI VEKINEEQNK AAA
101: GRRKRRRMRP VKNEEEVESQ RMIHIAVERN RRKQMNEHLA ALRSLMPPAH TQRGDQASIV GGAINFVKEL EQLLQSLEAR RRSPQCAAYA VDPDDAGPFA
201: DFLTFPQYSM CAVIAAPENT GHHREGGAVA EQEASGSKPS AVADVEATMV ESHANLRVLS RRRPRQLLRL VLGLQGHRLT VLHLNMSSGA HMVLYSFSLK
301: VEDDCQLTSV GEIAAAAHHI VEKINEEQNK AAA
001: MSGLMSFGEL EDQFGQISDT TMEEKIPFLQ MLQCIEHPFT TTEPNQFLQS LLQIQTLESK SCLTLETNIK RDPGQTDDPE KDPRTENGAV TVKEKRKRKR
101: TRAPKNKDEV ENQRMTHIAV ERNRRRQMNE HLNSLRSLMP PSFLQRGDQA SIVGGAIDFI KELEQLLQSL EAEKRKDGTD ETPKTASCSS SSSLACTNSS
201: ISSVSTTSEN GFTARFGGGD TTEVEATVIQ NHVSLKVRCK RGKRQILKAI VSIEELKLAI LHLTISSSFD FVIYSFNLKM EDGCKLGSAD EIATAVHQIF
301: EQINGEVMWS NLSRT
101: TRAPKNKDEV ENQRMTHIAV ERNRRRQMNE HLNSLRSLMP PSFLQRGDQA SIVGGAIDFI KELEQLLQSL EAEKRKDGTD ETPKTASCSS SSSLACTNSS
201: ISSVSTTSEN GFTARFGGGD TTEVEATVIQ NHVSLKVRCK RGKRQILKAI VSIEELKLAI LHLTISSSFD FVIYSFNLKM EDGCKLGSAD EIATAVHQIF
301: EQINGEVMWS NLSRT
Arabidopsis Description
BHLH57Transcription factor bHLH57 [Source:UniProtKB/Swiss-Prot;Acc:Q9M128]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.