Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU93358 | Sorghum | nucleus | 92.6 | 89.16 |
| Zm00001d048478_P001 | Maize | nucleus | 83.6 | 80.25 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 77.49 | 77.49 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 72.99 | 74.92 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 71.7 | 74.33 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 72.03 | 73.93 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 71.7 | 73.6 |
| GSMUA_Achr11P... | Banana | nucleus | 40.19 | 43.86 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 41.16 | 43.84 |
| GSMUA_Achr11P... | Banana | nucleus | 45.02 | 42.42 |
| Zm00001d031260_P001 | Maize | nucleus | 26.05 | 37.5 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 43.73 | 37.16 |
| CDY51710 | Canola | nucleus | 36.66 | 36.66 |
| Bra037414.1-P | Field mustard | nucleus | 36.66 | 36.66 |
| CDY07143 | Canola | nucleus | 35.69 | 35.81 |
| Bra004505.1-P | Field mustard | nucleus | 30.55 | 35.06 |
| AT4G01460.2 | Thale cress | nucleus | 34.41 | 33.97 |
| Zm00001d009778_P001 | Maize | nucleus | 22.83 | 32.42 |
| CDY11386 | Canola | nucleus | 28.94 | 32.26 |
| CDY27521 | Canola | nucleus | 31.83 | 31.94 |
| Bra007644.1-P | Field mustard | nucleus | 28.62 | 31.9 |
| CDY48013 | Canola | nucleus | 32.15 | 31.45 |
| Bra040483.1-P | Field mustard | nucleus | 32.15 | 31.45 |
| Zm00001d051509_P001 | Maize | nucleus | 33.44 | 31.33 |
| CDY68483 | Canola | nucleus | 32.15 | 31.25 |
| CDX80049 | Canola | nucleus | 31.19 | 30.99 |
| Zm00001d027987_P001 | Maize | nucleus | 32.8 | 30.82 |
| CDY41561 | Canola | nucleus | 30.55 | 30.45 |
| Zm00001d020790_P001 | Maize | nucleus | 32.48 | 30.42 |
| Zm00001d026046_P001 | Maize | nucleus | 32.8 | 30.36 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 35.05 | 30.19 |
| Zm00001d005939_P001 | Maize | nucleus | 31.83 | 29.73 |
| CDY55926 | Canola | nucleus | 30.87 | 29.72 |
| Zm00001d002492_P001 | Maize | mitochondrion | 16.72 | 29.55 |
| KRH47774 | Soybean | nucleus | 36.33 | 29.43 |
| CDX76598 | Canola | nucleus | 29.26 | 28.89 |
| Zm00001d048229_P001 | Maize | nucleus | 33.12 | 28.85 |
| KRH06347 | Soybean | nucleus | 36.01 | 28.14 |
| AT2G46810.1 | Thale cress | nucleus | 33.44 | 28.03 |
| Zm00001d017677_P001 | Maize | nucleus | 32.48 | 27.6 |
| CDY55929 | Canola | nucleus | 28.94 | 26.95 |
| Zm00001d052192_P001 | Maize | nucleus | 29.26 | 26.38 |
| AT3G61950.1 | Thale cress | nucleus | 29.9 | 25.98 |
| Zm00001d018119_P001 | Maize | nucleus | 28.94 | 25.57 |
| Zm00001d009715_P001 | Maize | nucleus | 26.37 | 19.62 |
| Zm00001d053391_P001 | Maize | cytosol, nucleus, plastid | 21.86 | 18.13 |
| Zm00001d046096_P001 | Maize | nucleus | 19.94 | 17.92 |
| Zm00001d016095_P001 | Maize | nucleus | 20.9 | 16.54 |
Protein Annotations
| EnsemblPlants:Zm00001d027419_P001 | EnsemblPlants:Zm00001d027419_T001 | EnsemblPlantsGene:Zm00001d027419 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF20 | PFAM:PF00010 | PFscan:PS50888 | ProteinID:ONL93124.1 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0008448EDD | UniProt:A0A1D6JM27 | MapMan:15.5.32 | : |
Description
bHLH-transcription factor 140Transcription factor bHLH57
Coordinates
chr1:+:4891941..4894990
Molecular Weight (calculated)
32977.2 Da
IEP (calculated)
8.984
GRAVY (calculated)
-0.134
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTVAVMEQW ADKQQQAAST NAAAAAAQMP FLALLQGAGV VVEAEQQEEQ HHDGRKRQAF ARAVSDLDLL ESCVTQAVAP AAAASAPVAG RTERRRKRQR
101: PRARAAPPPE KRKKPEEAES QRMTHIAVER NRRRLMNDHL ASLRSLIPSS YTPRGDQATV VGGAIDYVKQ LEQQLVALQA AAAARRGVAG TGAAAVATVA
201: SDGVFVSPQY ASYSDSRGAG AGVDVEATAA VGGHVRVRVA GRRWPGRLVR VVAALEDLRL AVLHLAVTSV GHDAVVYCFN LKMEEGCEVA TADEVATVVH
301: QIFAYAAGAC C
101: PRARAAPPPE KRKKPEEAES QRMTHIAVER NRRRLMNDHL ASLRSLIPSS YTPRGDQATV VGGAIDYVKQ LEQQLVALQA AAAARRGVAG TGAAAVATVA
201: SDGVFVSPQY ASYSDSRGAG AGVDVEATAA VGGHVRVRVA GRRWPGRLVR VVAALEDLRL AVLHLAVTSV GHDAVVYCFN LKMEEGCEVA TADEVATVVH
301: QIFAYAAGAC C
001: MERSIQGQNK LCCLDQKVNV RRSLQVQETV EDHQSFALEE EEQQLSTPSL LQDTTIPFLQ MLQQSEDPSP FLSFKDPSFL ALLSLQTLEK PWELENYLPH
101: EVPEFHSPIH SETNHYYHNP SLEGVNEAIS NQELPFNPLE NARSRRKRKN NNLASLMTRE KRKRRRTKPT KNIEEIESQR MTHIAVERNR RRQMNVHLNS
201: LRSIIPSSYI QRGDQASIVG GAIDFVKILE QQLQSLEAQK RSQQSDDNKE QIPEDNSLRN ISSNKLRASN KEEQSSKLKI EATVIESHVN LKIQCTRKQG
301: QLLRSIILLE KLRFTVLHLN ITSPTNTSVS YSFNLKMEDE CNLGSADEIT AAIRQIFDS
101: EVPEFHSPIH SETNHYYHNP SLEGVNEAIS NQELPFNPLE NARSRRKRKN NNLASLMTRE KRKRRRTKPT KNIEEIESQR MTHIAVERNR RRQMNVHLNS
201: LRSIIPSSYI QRGDQASIVG GAIDFVKILE QQLQSLEAQK RSQQSDDNKE QIPEDNSLRN ISSNKLRASN KEEQSSKLKI EATVIESHVN LKIQCTRKQG
301: QLLRSIILLE KLRFTVLHLN ITSPTNTSVS YSFNLKMEDE CNLGSADEIT AAIRQIFDS
Arabidopsis Description
BHLH70Transcription factor bHLH70 [Source:UniProtKB/Swiss-Prot;Acc:O81037]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.