Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004505.1-P | Field mustard | nucleus | 85.94 | 99.26 |
| CDY41561 | Canola | nucleus | 96.17 | 96.47 |
| CDY27521 | Canola | nucleus | 69.97 | 70.65 |
| CDY48013 | Canola | nucleus | 69.65 | 68.55 |
| AT2G46810.1 | Thale cress | nucleus | 74.44 | 62.8 |
| CDY11386 | Canola | nucleus | 45.37 | 50.9 |
| CDX76598 | Canola | nucleus | 48.24 | 47.94 |
| CDY55926 | Canola | nucleus | 48.56 | 47.06 |
| CDY68483 | Canola | nucleus | 47.92 | 46.88 |
| CDY55929 | Canola | nucleus | 45.69 | 42.81 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 45.05 | 39.06 |
| CDY37634 | Canola | nucleus | 27.8 | 38.16 |
| CDY51710 | Canola | nucleus | 37.7 | 37.94 |
| CDY07143 | Canola | nucleus | 37.06 | 37.42 |
| KRH47774 | Soybean | nucleus | 45.37 | 36.98 |
| KRH06347 | Soybean | nucleus | 44.73 | 35.18 |
| GSMUA_Achr11P... | Banana | nucleus | 31.95 | 35.09 |
| CDY18843 | Canola | nucleus | 22.36 | 34.83 |
| CDY24717 | Canola | nucleus | 21.73 | 33.83 |
| CDY05233 | Canola | nucleus | 22.04 | 33.82 |
| CDY08066 | Canola | nucleus | 22.04 | 33.33 |
| CDY58338 | Canola | nucleus | 22.04 | 33.33 |
| CDY41479 | Canola | nucleus | 30.35 | 33.22 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 30.67 | 32.88 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 30.99 | 32.33 |
| CDX91680 | Canola | nucleus | 29.39 | 32.17 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 31.95 | 32.15 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 30.99 | 32.01 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 30.99 | 32.01 |
| CDY04811 | Canola | nucleus | 30.35 | 31.56 |
| GSMUA_Achr11P... | Banana | nucleus | 33.23 | 31.52 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 30.35 | 31.35 |
| CDY21365 | Canola | nucleus | 30.03 | 31.23 |
| CDY12528 | Canola | nucleus | 28.11 | 31.21 |
| Zm00001d027419_P001 | Maize | nucleus | 30.99 | 31.19 |
| Zm00001d048478_P001 | Maize | nucleus | 31.95 | 30.86 |
| OQU93358 | Sorghum | nucleus | 30.99 | 30.03 |
| CDY03201 | Canola | cytosol | 17.25 | 29.83 |
| CDY37820 | Canola | nucleus | 20.77 | 29.82 |
| CDY46652 | Canola | nucleus | 26.52 | 29.43 |
| CDX68274 | Canola | nucleus | 30.35 | 29.32 |
| CDY50447 | Canola | nucleus | 30.35 | 29.32 |
| CDX96382 | Canola | nucleus | 30.35 | 29.23 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 33.87 | 28.96 |
| CDX72877 | Canola | nucleus | 30.03 | 28.66 |
| CDY03650 | Canola | nucleus | 29.71 | 28.53 |
| CDX82171 | Canola | nucleus | 29.39 | 28.22 |
| CDY41734 | Canola | nucleus | 26.84 | 27.91 |
| CDY65719 | Canola | nucleus | 26.84 | 27.91 |
| CDY35175 | Canola | nucleus | 25.24 | 26.87 |
| CDX77682 | Canola | nucleus | 27.8 | 26.85 |
| CDY63053 | Canola | nucleus | 27.16 | 26.23 |
| CDY33966 | Canola | nucleus | 24.92 | 25.83 |
| CDX85167 | Canola | nucleus | 26.52 | 21.34 |
| CDY38734 | Canola | nucleus | 23.96 | 21.25 |
| CDY19692 | Canola | nucleus | 23.64 | 20.96 |
| CDY47059 | Canola | nucleus | 23.32 | 20.92 |
| CDY14397 | Canola | nucleus | 23.64 | 20.85 |
| CDX77460 | Canola | nucleus | 23.64 | 20.79 |
| CDX92996 | Canola | nucleus | 26.84 | 20.74 |
| CDX94841 | Canola | nucleus | 26.52 | 20.34 |
| CDX96201 | Canola | nucleus | 21.73 | 19.32 |
| CDY64587 | Canola | nucleus | 22.04 | 18.6 |
| CDY18083 | Canola | nucleus | 22.68 | 18.49 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078CVP3 | EnsemblPlants:CDX80049 | ProteinID:CDX80049 | ProteinID:CDX80049.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00132935001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11969 |
| PANTHER:PTHR11969:SF29 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEF8AF | InterPro:bHLH_dom | SEG:seg |
Description
BnaA05g01070D
Coordinates
chrLK031819:+:1564347..1565753
Molecular Weight (calculated)
36050.2 Da
IEP (calculated)
8.602
GRAVY (calculated)
-0.597
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKIQGQNK LSVSSLDQKV IVRRSLQVQG SSEDQRFVLE EDMMQQSEDL SSVLSVKDPN FLRLLSLQTL QKPWELGDYL PHEVPEFHSP TNYYHQNPSL
101: ERVNEAISSQ ELQLNPLRKR RNNNNLVAAS VSREKRKRKR TKPTKDTEEM ESQRMTHITV ERNRRRQMNV YLSSLRSLIP SSYILRGDQA SIVGGAIDFV
201: KLLEQQLQLL EAQKVTQQTD TKDISLEQSS KLRIDATVIE SHVNLKIQCP KKQGQLLRSI IWLEKLRFTV LHLNVTSPCN ATVSYSFNLK MEEDCTLTSA
301: DEITAAVRQI LDC
101: ERVNEAISSQ ELQLNPLRKR RNNNNLVAAS VSREKRKRKR TKPTKDTEEM ESQRMTHITV ERNRRRQMNV YLSSLRSLIP SSYILRGDQA SIVGGAIDFV
201: KLLEQQLQLL EAQKVTQQTD TKDISLEQSS KLRIDATVIE SHVNLKIQCP KKQGQLLRSI IWLEKLRFTV LHLNVTSPCN ATVSYSFNLK MEEDCTLTSA
301: DEITAAVRQI LDC
001: MERSIQGQNK LCCLDQKVNV RRSLQVQETV EDHQSFALEE EEQQLSTPSL LQDTTIPFLQ MLQQSEDPSP FLSFKDPSFL ALLSLQTLEK PWELENYLPH
101: EVPEFHSPIH SETNHYYHNP SLEGVNEAIS NQELPFNPLE NARSRRKRKN NNLASLMTRE KRKRRRTKPT KNIEEIESQR MTHIAVERNR RRQMNVHLNS
201: LRSIIPSSYI QRGDQASIVG GAIDFVKILE QQLQSLEAQK RSQQSDDNKE QIPEDNSLRN ISSNKLRASN KEEQSSKLKI EATVIESHVN LKIQCTRKQG
301: QLLRSIILLE KLRFTVLHLN ITSPTNTSVS YSFNLKMEDE CNLGSADEIT AAIRQIFDS
101: EVPEFHSPIH SETNHYYHNP SLEGVNEAIS NQELPFNPLE NARSRRKRKN NNLASLMTRE KRKRRRTKPT KNIEEIESQR MTHIAVERNR RRQMNVHLNS
201: LRSIIPSSYI QRGDQASIVG GAIDFVKILE QQLQSLEAQK RSQQSDDNKE QIPEDNSLRN ISSNKLRASN KEEQSSKLKI EATVIESHVN LKIQCTRKQG
301: QLLRSIILLE KLRFTVLHLN ITSPTNTSVS YSFNLKMEDE CNLGSADEIT AAIRQIFDS
Arabidopsis Description
BHLH70Transcription factor bHLH70 [Source:UniProtKB/Swiss-Prot;Acc:O81037]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.