Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007644.1-P | Field mustard | nucleus | 97.85 | 97.85 |
| CDX76598 | Canola | nucleus | 94.98 | 84.13 |
| CDY68483 | Canola | nucleus | 69.89 | 60.94 |
| CDY55926 | Canola | nucleus | 69.53 | 60.06 |
| AT3G61950.1 | Thale cress | nucleus | 74.19 | 57.82 |
| CDY55929 | Canola | nucleus | 67.38 | 56.29 |
| CDY41561 | Canola | nucleus | 51.25 | 45.83 |
| CDX80049 | Canola | nucleus | 50.9 | 45.37 |
| CDY27521 | Canola | nucleus | 48.75 | 43.87 |
| CDY48013 | Canola | nucleus | 49.46 | 43.4 |
| CDY37634 | Canola | nucleus | 30.47 | 37.28 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 48.03 | 37.12 |
| CDY07143 | Canola | nucleus | 41.22 | 37.1 |
| CDY51710 | Canola | nucleus | 41.22 | 36.98 |
| GSMUA_Achr11P... | Banana | nucleus | 37.28 | 36.49 |
| KRH47774 | Soybean | nucleus | 49.46 | 35.94 |
| CDY24717 | Canola | nucleus | 25.81 | 35.82 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 36.56 | 34.93 |
| KRH06347 | Soybean | nucleus | 49.82 | 34.92 |
| CDY18843 | Canola | nucleus | 25.09 | 34.83 |
| CDY05233 | Canola | nucleus | 25.45 | 34.8 |
| CDY58338 | Canola | nucleus | 25.45 | 34.3 |
| CDY08066 | Canola | nucleus | 25.45 | 34.3 |
| CDY41479 | Canola | nucleus | 33.69 | 32.87 |
| GSMUA_Achr11P... | Banana | nucleus | 37.99 | 32.12 |
| CDX91680 | Canola | nucleus | 32.26 | 31.47 |
| CDY12528 | Canola | nucleus | 31.18 | 30.85 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 32.97 | 30.36 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 32.97 | 30.36 |
| CDY21365 | Canola | nucleus | 32.62 | 30.23 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 32.62 | 30.03 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 32.26 | 30.0 |
| CDY50447 | Canola | nucleus | 34.77 | 29.94 |
| CDX68274 | Canola | nucleus | 34.77 | 29.94 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 33.33 | 29.9 |
| CDY04811 | Canola | nucleus | 32.26 | 29.9 |
| CDY37820 | Canola | nucleus | 23.3 | 29.82 |
| CDY46652 | Canola | nucleus | 30.11 | 29.79 |
| Zm00001d027419_P001 | Maize | nucleus | 32.26 | 28.94 |
| CDX96382 | Canola | nucleus | 33.33 | 28.62 |
| CDX82171 | Canola | nucleus | 33.33 | 28.53 |
| CDY03650 | Canola | nucleus | 33.33 | 28.53 |
| Zm00001d048478_P001 | Maize | nucleus | 32.97 | 28.4 |
| CDY03201 | Canola | cytosol | 18.28 | 28.18 |
| OQU93358 | Sorghum | nucleus | 32.62 | 28.17 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 36.92 | 28.14 |
| CDX72877 | Canola | nucleus | 32.97 | 28.05 |
| CDY65719 | Canola | nucleus | 29.03 | 26.91 |
| CDY41734 | Canola | nucleus | 28.67 | 26.58 |
| CDY35175 | Canola | nucleus | 27.96 | 26.53 |
| CDY33966 | Canola | nucleus | 28.32 | 26.16 |
| CDY63053 | Canola | nucleus | 30.11 | 25.93 |
| CDX77682 | Canola | nucleus | 30.11 | 25.93 |
| CDX77460 | Canola | nucleus | 28.32 | 22.19 |
| CDX85167 | Canola | nucleus | 30.11 | 21.59 |
| CDX92996 | Canola | nucleus | 30.47 | 20.99 |
| CDY19692 | Canola | nucleus | 26.16 | 20.68 |
| CDY47059 | Canola | nucleus | 25.81 | 20.63 |
| CDX94841 | Canola | nucleus | 30.11 | 20.59 |
| CDY14397 | Canola | nucleus | 26.16 | 20.56 |
| CDY38734 | Canola | nucleus | 25.45 | 20.11 |
| CDX96201 | Canola | nucleus | 23.66 | 18.75 |
| CDY64587 | Canola | nucleus | 23.66 | 17.79 |
| CDY18083 | Canola | nucleus | 24.37 | 17.71 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078FDI6 | UniProt:A0A078FDI6 | EnsemblPlants:CDY11386 | ProteinID:CDY11386 |
| ProteinID:CDY11386.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00049445001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11969 |
| PANTHER:PTHR11969:SF29 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEAF32 | InterPro:bHLH_dom | SEG:seg |
Description
BnaA09g39520DBnaA09g39520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDI6]
Coordinates
chrLK032011:+:174362..176039
Molecular Weight (calculated)
32008.3 Da
IEP (calculated)
9.496
GRAVY (calculated)
-0.662
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDTVPFLQM LQSEEDPLPF TSFKELLSLQ NLQHHWELES YLSHNETNPV STSSMEVTRQ ALSSQELPFS RQQDMTVPSS SSTPNSRRKR KTISNPPEVT
101: RGKRKRRKTK PSKDIEEIEN QRINHIAVER NRRRQMNEHI SSLRSLLPPS YIQRGDQASI VGGAINYAKV LEQVIQSLEL QRRTKQSCGV ENRVTCVPRI
201: EATLIQNHVN LKVECRKKQG QLLKGIVSLE KLRLTVLHLN ISSLSCSSVS YCFNLKMEDD CKLESAEEIT KVAHQIFDT
101: RGKRKRRKTK PSKDIEEIEN QRINHIAVER NRRRQMNEHI SSLRSLLPPS YIQRGDQASI VGGAINYAKV LEQVIQSLEL QRRTKQSCGV ENRVTCVPRI
201: EATLIQNHVN LKVECRKKQG QLLKGIVSLE KLRLTVLHLN ISSLSCSSVS YCFNLKMEDD CKLESAEEIT KVAHQIFDT
001: MERFQGHINP CFFDRKPDVR SLEVQGFAEA QSFAFKEKEE ESLQDTVPFL QMLQSEDPSS FFSIKEPNFL TLLSLQTLKE PWELERYLSL EDSQFHSPVQ
101: SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA
201: LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK
301: GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH RIFDIPTI
101: SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA
201: LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK
301: GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH RIFDIPTI
Arabidopsis Description
BHLH67Transcription factor bHLH67 [Source:UniProtKB/Swiss-Prot;Acc:Q700E4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.