Factsheet for Bra007644.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11386	Canola	nucleus	97.85	97.85
AT3G61950.1	Thale cress	nucleus	74.19	57.82
Bra004505.1-P	Field mustard	nucleus	50.54	52.03
Bra040483.1-P	Field mustard	nucleus	49.46	43.4
Bra040856.1-P	Field mustard	nucleus	30.82	39.63
VIT_15s0048g02510.t01	Wine grape	nucleus	48.03	37.12
Bra037414.1-P	Field mustard	nucleus	41.22	36.98
KRH47774	Soybean	nucleus	49.46	35.94
Bra020775.1-P	Field mustard	nucleus	25.81	35.82
GSMUA_Achr11P...	Banana	nucleus	36.56	35.79
KRH06347	Soybean	nucleus	50.18	35.18
Bra040234.1-P	Field mustard	nucleus	25.09	34.83
Bra001183.1-P	Field mustard	nucleus	25.45	34.3
GSMUA_Achr5P20300_001	Banana	nucleus	35.84	34.25
GSMUA_Achr11P...	Banana	nucleus	37.63	31.82
Bra016377.1-P	Field mustard	nucleus	33.69	31.13
TraesCS5A01G515800.1	Wheat	extracellular	32.62	30.03
HORVU4Hr1G084850.2	Barley	extracellular	32.62	30.03
Bra003886.1-P	Field mustard	nucleus	34.77	29.94
TraesCS4D01G342000.1	Wheat	extracellular	32.26	29.7
TraesCS4B01G347100.1	Wheat	extracellular	31.9	29.67
Os03t0122100-00	Rice	mitochondrion, nucleus, plastid	32.97	29.58
Bra012329.1-P	Field mustard	nucleus	31.9	29.37
Bra031865.1-P	Field mustard	nucleus	22.94	29.36
Bra016080.1-P	Field mustard	nucleus	33.69	28.92
Bra008017.1-P	Field mustard	nucleus	33.69	28.83
Zm00001d027419_P001	Maize	nucleus	31.9	28.62
Bra025007.1-P	Field mustard	nucleus	27.96	28.47
Zm00001d048478_P001	Maize	nucleus	32.62	28.09
GSMUA_Achr8P12330_001	Banana	golgi, vacuole	36.56	27.87
OQU93358	Sorghum	nucleus	32.26	27.86
Bra017533.1-P	Field mustard	nucleus	27.24	26.3
Bra027958.1-P	Field mustard	nucleus	26.16	25.0
Bra028357.1-P	Field mustard	nucleus	30.47	21.25
Bra001929.1-P	Field mustard	nucleus	30.47	20.99
Bra029088.1-P	Field mustard	nucleus	23.3	19.35
Bra028351.1-P	Field mustard	nucleus	24.37	18.89
Bra022638.1-P	Field mustard	nucleus	23.66	18.86
Bra003073.1-P	Field mustard	nucleus	24.37	15.7

Protein Annotations

EnsemblPlants:Bra007644.1	EnsemblPlants:Bra007644.1-P	EnsemblPlantsGene:Bra007644	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR11969	PANTHER:PTHR11969:SF29	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002542A4A	UniProt:M4CTV0	MapMan:15.5.32	:	:

Description

AT2G46810 (E=2e-070) | basic helix-loop-helix (bHLH) family protein

Coordinates

chrA09:+:30249206..30250186

Molecular Weight (calculated)

32091.5 Da

IEP (calculated)

9.496

GRAVY (calculated)

-0.654

Length

279 amino acids

Sequence
(BLAST)

001: MQDTVPFLQM LQSEEDPLPF TSFKELLSLQ NLHNHWELQS YLSHNETNPV STSSMEVTRQ ALSSQELPFS RQQDMTVPSS SSTPNSRRKR KIITNPPEVT
101: RGKRKRRKTK PSKDIEEIEN QRINHIAVER NRRRQMNEHI SSLRSLLPPS YIQRGDQASI VGGAINYAKV LEQVIQSLEL QRRTKQSCEV ENRVTCVPRI
201: EATLIQNHVN LKVECRKKQG QLLKGIVSLE KLRLTVLHLN ISSLSCSSVS YCFNLKMEDD CKLESAEEIT KVAHQIFDT

Best Arabidopsis Sequence Match ( AT3G61950.1 )
(BLAST)

001: MERFQGHINP CFFDRKPDVR SLEVQGFAEA QSFAFKEKEE ESLQDTVPFL QMLQSEDPSS FFSIKEPNFL TLLSLQTLKE PWELERYLSL EDSQFHSPVQ
101: SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA
201: LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK
301: GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH RIFDIPTI

Arabidopsis Description

BHLH67Transcription factor bHLH67 [Source:UniProtKB/Swiss-Prot;Acc:Q700E4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.