Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47774 | Soybean | nucleus | 62.33 | 58.59 |
| KRH06347 | Soybean | nucleus | 60.66 | 55.03 |
| Bra004505.1-P | Field mustard | nucleus | 39.61 | 52.77 |
| Bra007644.1-P | Field mustard | nucleus | 37.12 | 48.03 |
| CDY11386 | Canola | nucleus | 37.12 | 48.03 |
| AT4G01460.2 | Thale cress | nucleus | 40.72 | 46.67 |
| Bra037414.1-P | Field mustard | nucleus | 39.89 | 46.3 |
| CDY51710 | Canola | nucleus | 39.89 | 46.3 |
| GSMUA_Achr11P... | Banana | nucleus | 36.29 | 45.96 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 36.84 | 45.55 |
| CDY07143 | Canola | nucleus | 39.06 | 45.48 |
| CDY41561 | Canola | nucleus | 39.06 | 45.19 |
| CDX80049 | Canola | nucleus | 39.06 | 45.05 |
| AT2G46810.1 | Thale cress | nucleus | 44.88 | 43.67 |
| CDY27521 | Canola | nucleus | 36.84 | 42.9 |
| VIT_05s0020g02700.t01 | Wine grape | nucleus | 22.44 | 42.63 |
| CDX76598 | Canola | nucleus | 36.84 | 42.22 |
| AT3G61950.1 | Thale cress | nucleus | 41.83 | 42.18 |
| CDY48013 | Canola | nucleus | 36.84 | 41.82 |
| Bra040483.1-P | Field mustard | nucleus | 36.84 | 41.82 |
| GSMUA_Achr11P... | Banana | nucleus | 38.23 | 41.82 |
| CDY68483 | Canola | nucleus | 36.01 | 40.62 |
| CDY55926 | Canola | nucleus | 35.73 | 39.94 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 39.34 | 38.8 |
| VIT_18s0001g06650.t01 | Wine grape | nucleus | 32.41 | 37.74 |
| VIT_07s0191g00240.t01 | Wine grape | nucleus | 32.41 | 36.34 |
| CDY55929 | Canola | nucleus | 33.52 | 36.23 |
| VIT_14s0128g00110.t01 | Wine grape | nucleus | 32.13 | 35.91 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 30.75 | 35.69 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 29.92 | 35.64 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 29.36 | 35.33 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 29.64 | 35.31 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 29.64 | 35.31 |
| Zm00001d027419_P001 | Maize | nucleus | 30.19 | 35.05 |
| VIT_02s0012g01450.t01 | Wine grape | nucleus | 29.92 | 34.29 |
| OQU93358 | Sorghum | nucleus | 30.19 | 33.75 |
| Zm00001d048478_P001 | Maize | nucleus | 29.92 | 33.33 |
| VIT_05s0029g00050.t01 | Wine grape | nucleus | 32.41 | 29.47 |
| VIT_16s0050g02500.t01 | Wine grape | nucleus | 26.04 | 27.81 |
Protein Annotations
| EntrezGene:100248794 | wikigene:100248794 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:AM487016 | ProteinID:CAN75452 |
| ProteinID:CAN75452.1 | ProteinID:CCB61305 | ProteinID:CCB61305.1 | ncoils:Coil | UniProt:F6I2Y8 | EMBL:FN596739 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EntrezGene:LOC100248794 | wikigene:LOC100248794 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF29 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0002109EF0 | ArrayExpress:VIT_15s0048g02510 | EnsemblPlantsGene:VIT_15s0048g02510 | EnsemblPlants:VIT_15s0048g02510.t01 | RefSeq:XP_002267819 | RefSeq:XP_002267819.2 |
| RefSeq:XP_010661504.1 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr15:-:16674193..16676470
Molecular Weight (calculated)
40386.6 Da
IEP (calculated)
7.400
GRAVY (calculated)
-0.706
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFLQMLQSV ESPPFSPFTE PNFQALLRLQ HQKKPWGMTH LTELDSRIQA RELESCITHD ILEMHSPVKS ETKEPQHHQH STPCLEGTSS ECNQDQPNSA
101: ENGCLDTNSG SSPAWVQPQT RQKQAHLSKS PPITRERRKR KRTRPTKNKE EVESQRMTHI AVERNRRRQM NDHLNALRSL MPTSYIQRGD QASIIGGAID
201: FVKELEQLLE SLQAQKRMRR SEEGGDASTN SSSSSPKIAS KGLCTQHRFA PDESNSAEGG RSDEFTFTAD NKSAAADIEV TVIQTHVNLK IQCPRRPGQL
301: LKAIVALEDL SLTVLHLNIT SLQSTVLYSF NLKIEDDCKL GSADEVAAAV HQVFSFINGS S
101: ENGCLDTNSG SSPAWVQPQT RQKQAHLSKS PPITRERRKR KRTRPTKNKE EVESQRMTHI AVERNRRRQM NDHLNALRSL MPTSYIQRGD QASIIGGAID
201: FVKELEQLLE SLQAQKRMRR SEEGGDASTN SSSSSPKIAS KGLCTQHRFA PDESNSAEGG RSDEFTFTAD NKSAAADIEV TVIQTHVNLK IQCPRRPGQL
301: LKAIVALEDL SLTVLHLNIT SLQSTVLYSF NLKIEDDCKL GSADEVAAAV HQVFSFINGS S
001: MFVLRVSNQS FKLHQQVQCK DEIFCLDQKV NVRRSLQVQE TVEDHQSFAL EEEEQQLSTP SLLQDTTIPF LQMLQQSEDP SPFLSFKDPS FLALLSLQTL
101: EKPWELENYL PHEVPEFHSP IHSETNHYYH NPSLEGVNEA ISNQELPFNP LENARSRRKR KNNNLASLMT REKRKRRRTK PTKNIEEIES QRMTHIAVER
201: NRRRQMNVHL NSLRSIIPSS YIQRGDQASI VGGAIDFVKI LEQQLQSLEA QKRSQQSDDN KEQIPEDNSL RNISSNKLRA SNKEEQSSKL KIEATVIESH
301: VNLKIQCTRK QGQLLRSIIL LEKLRFTVLH LNITSPTNTS VSYSFNLKME DECNLGSADE ITAAIRQIFD S
101: EKPWELENYL PHEVPEFHSP IHSETNHYYH NPSLEGVNEA ISNQELPFNP LENARSRRKR KNNNLASLMT REKRKRRRTK PTKNIEEIES QRMTHIAVER
201: NRRRQMNVHL NSLRSIIPSS YIQRGDQASI VGGAIDFVKI LEQQLQSLEA QKRSQQSDDN KEQIPEDNSL RNISSNKLRA SNKEEQSSKL KIEATVIESH
301: VNLKIQCTRK QGQLLRSIIL LEKLRFTVLH LNITSPTNTS VSYSFNLKME DECNLGSADE ITAAIRQIFD S
Arabidopsis Description
BHLH70Transcription factor bHLH70 [Source:UniProtKB/Swiss-Prot;Acc:O81037]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.