Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037414.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY07143 | Canola | nucleus | 96.14 | 96.45 |
| AT4G01460.2 | Thale cress | nucleus | 80.39 | 79.37 |
| CDY37634 | Canola | nucleus | 30.87 | 42.11 |
| CDY11386 | Canola | nucleus | 36.98 | 41.22 |
| GSMUA_Achr11P... | Banana | nucleus | 37.3 | 40.7 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 37.62 | 40.07 |
| CDY68483 | Canola | nucleus | 41.16 | 40.0 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 46.3 | 39.89 |
| CDY55926 | Canola | nucleus | 41.16 | 39.63 |
| KRH47774 | Soybean | nucleus | 48.87 | 39.58 |
| KRH06347 | Soybean | nucleus | 48.55 | 37.94 |
| CDX80049 | Canola | nucleus | 37.94 | 37.7 |
| CDY41561 | Canola | nucleus | 37.62 | 37.5 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 36.33 | 37.29 |
| CDX76598 | Canola | nucleus | 37.62 | 37.14 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 35.69 | 37.0 |
| CDY18843 | Canola | nucleus | 23.79 | 36.82 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 36.66 | 36.66 |
| Zm00001d027419_P001 | Maize | nucleus | 36.66 | 36.66 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 35.69 | 36.63 |
| CDY48013 | Canola | nucleus | 37.3 | 36.48 |
| CDY27521 | Canola | nucleus | 36.33 | 36.45 |
| CDY24717 | Canola | nucleus | 23.47 | 36.32 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 35.37 | 36.3 |
| CDY05233 | Canola | nucleus | 23.79 | 36.27 |
| GSMUA_Achr11P... | Banana | nucleus | 38.26 | 36.06 |
| Zm00001d048478_P001 | Maize | nucleus | 37.3 | 35.8 |
| CDY08066 | Canola | nucleus | 23.79 | 35.75 |
| CDY58338 | Canola | nucleus | 23.79 | 35.75 |
| CDY55929 | Canola | nucleus | 37.94 | 35.33 |
| OQU93358 | Sorghum | nucleus | 36.33 | 34.98 |
| CDY04811 | Canola | nucleus | 33.12 | 34.22 |
| CDY21365 | Canola | nucleus | 32.8 | 33.89 |
| CDY41479 | Canola | nucleus | 30.55 | 33.22 |
| CDY12528 | Canola | nucleus | 29.9 | 32.98 |
| CDX91680 | Canola | nucleus | 30.23 | 32.87 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 37.94 | 32.24 |
| CDY03201 | Canola | cytosol | 18.65 | 32.04 |
| CDY37820 | Canola | nucleus | 22.19 | 31.65 |
| CDX77682 | Canola | nucleus | 32.8 | 31.48 |
| CDX96382 | Canola | nucleus | 32.8 | 31.38 |
| CDY65719 | Canola | nucleus | 30.23 | 31.23 |
| CDY46652 | Canola | nucleus | 28.3 | 31.21 |
| CDY63053 | Canola | nucleus | 32.48 | 31.17 |
| CDX72877 | Canola | nucleus | 32.8 | 31.1 |
| CDY41734 | Canola | nucleus | 29.9 | 30.9 |
| CDY50447 | Canola | nucleus | 32.15 | 30.86 |
| CDX68274 | Canola | nucleus | 32.15 | 30.86 |
| CDY03650 | Canola | nucleus | 32.15 | 30.67 |
| CDX82171 | Canola | nucleus | 31.83 | 30.37 |
| CDY35175 | Canola | nucleus | 28.62 | 30.27 |
| CDY33966 | Canola | nucleus | 27.33 | 28.15 |
| CDX85167 | Canola | nucleus | 30.87 | 24.68 |
| CDX92996 | Canola | nucleus | 31.83 | 24.44 |
| CDY47059 | Canola | nucleus | 27.33 | 24.36 |
| CDY19692 | Canola | nucleus | 27.33 | 24.08 |
| CDY14397 | Canola | nucleus | 27.33 | 23.94 |
| CDX77460 | Canola | nucleus | 27.33 | 23.88 |
| CDY38734 | Canola | nucleus | 27.01 | 23.8 |
| CDX94841 | Canola | nucleus | 31.19 | 23.77 |
| CDY18083 | Canola | nucleus | 26.37 | 21.35 |
| CDX96201 | Canola | nucleus | 24.12 | 21.31 |
| CDY64587 | Canola | nucleus | 25.4 | 21.29 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078IKX8 | UniProt:A0A078IKX8 | EnsemblPlants:CDY51710 | ProteinID:CDY51710 |
| ProteinID:CDY51710.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00004061001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF29 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002542082 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA09g51970DBnaA09g51970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKX8]
Coordinates
chrLK033021:-:1541..3818
Molecular Weight (calculated)
34838.4 Da
IEP (calculated)
6.412
GRAVY (calculated)
-0.537
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGLMRFGGL EEQFSHISEN AINEKTPFLQ MLQCIEPEPN QILQSLLQSQ TLEPESCLTL ETIKRDPGLE EDPVKDPKIE DGAEAKVKEK RKRKRTRAPK
101: NKDEVESQRM THIAVERNRR RQMNEHLNSL RSLMPPTFLQ RGDQASIVGG AIDYIKELEQ LLQSLEAEKH SEGASENPKA ASSYSSSSSR ACTNSSVSSI
201: SPTSEDGFTA RFGGGETAEV EATVIQNHVS LKVRCKRGRG QILRAIISIE NLKLSILHLT ISTSFDFVFY SFNLKIEEGC KVRSADEIAT AVHQIFEQIN
301: GVMMWSNLSR A
101: NKDEVESQRM THIAVERNRR RQMNEHLNSL RSLMPPTFLQ RGDQASIVGG AIDYIKELEQ LLQSLEAEKH SEGASENPKA ASSYSSSSSR ACTNSSVSSI
201: SPTSEDGFTA RFGGGETAEV EATVIQNHVS LKVRCKRGRG QILRAIISIE NLKLSILHLT ISTSFDFVFY SFNLKIEEGC KVRSADEIAT AVHQIFEQIN
301: GVMMWSNLSR A
001: MSGLMSFGEL EDQFGQISDT TMEEKIPFLQ MLQCIEHPFT TTEPNQFLQS LLQIQTLESK SCLTLETNIK RDPGQTDDPE KDPRTENGAV TVKEKRKRKR
101: TRAPKNKDEV ENQRMTHIAV ERNRRRQMNE HLNSLRSLMP PSFLQRGDQA SIVGGAIDFI KELEQLLQSL EAEKRKDGTD ETPKTASCSS SSSLACTNSS
201: ISSVSTTSEN GFTARFGGGD TTEVEATVIQ NHVSLKVRCK RGKRQILKAI VSIEELKLAI LHLTISSSFD FVIYSFNLKM EDGCKLGSAD EIATAVHQIF
301: EQINGEVMWS NLSRT
101: TRAPKNKDEV ENQRMTHIAV ERNRRRQMNE HLNSLRSLMP PSFLQRGDQA SIVGGAIDFI KELEQLLQSL EAEKRKDGTD ETPKTASCSS SSSLACTNSS
201: ISSVSTTSEN GFTARFGGGD TTEVEATVIQ NHVSLKVRCK RGKRQILKAI VSIEELKLAI LHLTISSSFD FVIYSFNLKM EDGCKLGSAD EIATAVHQIF
301: EQINGEVMWS NLSRT
Arabidopsis Description
BHLH57Transcription factor bHLH57 [Source:UniProtKB/Swiss-Prot;Acc:Q9M128]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.