Factsheet for HORVU4Hr1G084850.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
mitochondrion 2
extracellular 2
nucleus 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G515800.1	Wheat	extracellular	95.05	95.05
TraesCS4D01G342000.1	Wheat	extracellular	95.05	95.05
TraesCS4B01G347100.1	Wheat	extracellular	93.4	94.33
Os03t0122100-00	Rice	mitochondrion, nucleus, plastid	80.53	78.46
Zm00001d027419_P001	Maize	nucleus	74.92	72.99
OQU93358	Sorghum	nucleus	74.92	70.28
Zm00001d048478_P001	Maize	nucleus	71.29	66.67
HORVU2Hr1G106030.2	Barley	cytosol, mitochondrion, nucleus	16.5	48.54
GSMUA_Achr11P...	Banana	nucleus	40.26	42.81
GSMUA_Achr5P20300_001	Banana	nucleus	40.26	41.78
GSMUA_Achr11P...	Banana	nucleus	44.55	40.91
Bra037414.1-P	Field mustard	nucleus	37.29	36.33
CDY51710	Canola	nucleus	37.29	36.33
CDY07143	Canola	nucleus	36.96	36.13
GSMUA_Achr8P12330_001	Banana	golgi, vacuole	43.23	35.79
AT4G01460.2	Thale cress	nucleus	35.64	34.29
Bra004505.1-P	Field mustard	nucleus	30.36	33.95
CDY11386	Canola	nucleus	30.36	32.97
Bra007644.1-P	Field mustard	nucleus	30.03	32.62
CDY68483	Canola	nucleus	34.32	32.5
CDY27521	Canola	nucleus	33.0	32.26
CDY55926	Canola	nucleus	33.33	31.27
CDX76598	Canola	nucleus	32.34	31.11
CDY41561	Canola	nucleus	32.01	31.09
CDX80049	Canola	nucleus	32.01	30.99
CDY48013	Canola	nucleus	31.68	30.19
Bra040483.1-P	Field mustard	nucleus	31.68	30.19
VIT_15s0048g02510.t01	Wine grape	nucleus	35.64	29.92
KRH47774	Soybean	nucleus	37.29	29.43
HORVU2Hr1G020990.1	Barley	nucleus	23.1	29.41
CDY55929	Canola	nucleus	32.01	29.04
AT2G46810.1	Thale cress	nucleus	34.65	28.3
HORVU6Hr1G067000.2	Barley	nucleus	32.01	27.95
AT3G61950.1	Thale cress	nucleus	33.0	27.93
KRH06347	Soybean	nucleus	36.63	27.89
HORVU6Hr1G081120.4	Barley	nucleus	29.04	25.43
HORVU4Hr1G078270.2	Barley	plastid	29.7	20.36
HORVU5Hr1G070000.3	Barley	nucleus, plastid	31.02	19.92
HORVU7Hr1G079250.1	Barley	cytosol	21.45	17.81
HORVU1Hr1G071330.3	Barley	nucleus	25.41	17.66

Protein Annotations

EMBL:AK355470	EnsemblPlants:HORVU4Hr1G084850.2	EnsemblPlantsGene:HORVU4Hr1G084850	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
ncoils:Coil	PANTHER:PTHR11969	PANTHER:PTHR11969:SF20	PFAM:PF00010	PFscan:PS50888	SEG:seg
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0002004936	UniProt:F2CV18	MapMan:15.5.32	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CV18]

Coordinates

chrchr4H:+:630183894..630187071

Molecular Weight (calculated)

32028.5 Da

IEP (calculated)

8.399

GRAVY (calculated)

-0.101

Length

303 amino acids

Sequence
(BLAST)

001: MERMQLQGPI LTSLCWADQA AASASAAQVP FLALLQGAMG DGGPGAKRES YSGGAGFACR PAASDVDLLE SCVTQLPAPP AIEAPAAKRR KRPRTRPRAA
101: PPPEKRKKPE EAECQRMTHI AVERNRRRLM NDHLASLRSL IPSDYIPRGD QATVVGGAID YVKQLEQQLV ALQALAAAQR GEGPVGTAAT AASDGVFVSP
201: QYTSFSEARG IGGGVDVEAM SAVGGHVRVR VAGRRWPGRL VRAVAAMENL RMAVLHLAVT SVGHDAVVYC FNLKMEDGCE VSTADEVATV VHQIFAYAAG
301: SCC

Best Arabidopsis Sequence Match ( AT2G46810.1 )
(BLAST)

001: MFVLRVSNQS FKLHQQVQCK DEIFCLDQKV NVRRSLQVQE TVEDHQSFAL EEEEQQLSTP SLLQDTTIPF LQMLQQSEDP SPFLSFKDPS FLALLSLQTL
101: EKPWELENYL PHEVPEFHSP IHSETNHYYH NPSLEGVNEA ISNQELPFNP LENARSRRKR KNNNLASLMT REKRKRRRTK PTKNIEEIES QRMTHIAVER
201: NRRRQMNVHL NSLRSIIPSS YIQRGDQASI VGGAIDFVKI LEQQLQSLEA QKRSQQSDDN KEQIPEDNSL RNISSNKLRA SNKEEQSSKL KIEATVIESH
301: VNLKIQCTRK QGQLLRSIIL LEKLRFTVLH LNITSPTNTS VSYSFNLKME DECNLGSADE ITAAIRQIFD S

Arabidopsis Description

BHLH70Transcription factor bHLH70 [Source:UniProtKB/Swiss-Prot;Acc:O81037]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.