Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11386 | Canola | nucleus | 57.82 | 74.19 |
| Bra007644.1-P | Field mustard | nucleus | 57.82 | 74.19 |
| CDX76598 | Canola | nucleus | 65.08 | 73.97 |
| CDY55926 | Canola | nucleus | 65.92 | 73.06 |
| CDY68483 | Canola | nucleus | 64.8 | 72.5 |
| CDY55929 | Canola | nucleus | 63.69 | 68.26 |
| AT2G46810.1 | Thale cress | nucleus | 60.61 | 58.49 |
| AT4G01460.2 | Thale cress | nucleus | 39.94 | 45.4 |
| KRH47774 | Soybean | nucleus | 46.09 | 42.97 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 42.18 | 41.83 |
| KRH06347 | Soybean | nucleus | 46.37 | 41.71 |
| GSMUA_Achr11P... | Banana | nucleus | 29.05 | 36.49 |
| AT3G06120.1 | Thale cress | nucleus | 20.39 | 36.14 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 29.05 | 35.62 |
| GSMUA_Achr11P... | Banana | nucleus | 31.28 | 33.94 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 28.21 | 33.67 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 28.49 | 33.66 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 28.21 | 33.33 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 27.93 | 33.0 |
| AT1G72210.1 | Thale cress | nucleus | 29.33 | 32.81 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 27.93 | 32.15 |
| AT1G22490.2 | Thale cress | nucleus | 27.93 | 30.67 |
| Zm00001d027419_P001 | Maize | nucleus | 25.98 | 29.9 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 30.17 | 29.51 |
| AT5G65320.1 | Thale cress | nucleus | 24.02 | 29.05 |
| Zm00001d048478_P001 | Maize | nucleus | 26.26 | 29.01 |
| OQU93358 | Sorghum | nucleus | 25.98 | 28.79 |
| AT5G46690.1 | Thale cress | nucleus | 24.58 | 26.91 |
| AT3G24140.1 | Thale cress | nucleus | 24.86 | 21.5 |
| AT5G53210.1 | Thale cress | nucleus | 19.83 | 19.51 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:825368 | ProteinID:AEE80283.1 | ProteinID:AEE80284.1 | EMBL:AF488600 |
| EMBL:AJ630481 | EMBL:AK118527 | ArrayExpress:AT3G61950 | EnsemblPlantsGene:AT3G61950 | RefSeq:AT3G61950 | TAIR:AT3G61950 |
| RefSeq:AT3G61950-TAIR-G | EnsemblPlants:AT3G61950.1 | TAIR:AT3G61950.1 | EMBL:AY088741 | EMBL:AY568653 | Unigene:At.22308 |
| EMBL:BT005298 | ProteinID:CAB71902.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| RefSeq:NP_567121.1 | RefSeq:NP_850735.1 | PFAM:PF00010 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0025022 | PFscan:PS50888 |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF29 | UniProt:Q700E4 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000016373F |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
BHLH67Transcription factor bHLH67 [Source:UniProtKB/Swiss-Prot;Acc:Q700E4]
Coordinates
chr3:+:22939388..22941482
Molecular Weight (calculated)
41032.6 Da
IEP (calculated)
6.745
GRAVY (calculated)
-0.633
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MERFQGHINP CFFDRKPDVR SLEVQGFAEA QSFAFKEKEE ESLQDTVPFL QMLQSEDPSS FFSIKEPNFL TLLSLQTLKE PWELERYLSL EDSQFHSPVQ
101: SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA
201: LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK
301: GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH RIFDIPTI
101: SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA
201: LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK
301: GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH RIFDIPTI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.