Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11386 | Canola | nucleus | 84.13 | 94.98 |
| CDY55926 | Canola | nucleus | 70.16 | 68.42 |
| CDY68483 | Canola | nucleus | 68.57 | 67.5 |
| AT3G61950.1 | Thale cress | nucleus | 73.97 | 65.08 |
| CDY55929 | Canola | nucleus | 67.94 | 64.07 |
| CDY41561 | Canola | nucleus | 48.25 | 48.72 |
| CDX80049 | Canola | nucleus | 47.94 | 48.24 |
| CDY27521 | Canola | nucleus | 46.98 | 47.74 |
| CDY48013 | Canola | nucleus | 46.35 | 45.91 |
| KRH47774 | Soybean | nucleus | 46.98 | 38.54 |
| CDY07143 | Canola | nucleus | 37.14 | 37.74 |
| KRH06347 | Soybean | nucleus | 47.62 | 37.69 |
| CDY51710 | Canola | nucleus | 37.14 | 37.62 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 42.22 | 36.84 |
| CDY37634 | Canola | nucleus | 26.67 | 36.84 |
| CDY24717 | Canola | nucleus | 23.17 | 36.32 |
| GSMUA_Achr11P... | Banana | nucleus | 32.7 | 36.14 |
| CDY18843 | Canola | nucleus | 22.54 | 35.32 |
| CDY05233 | Canola | nucleus | 22.86 | 35.29 |
| CDY08066 | Canola | nucleus | 22.86 | 34.78 |
| CDY58338 | Canola | nucleus | 22.86 | 34.78 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 32.06 | 34.59 |
| GSMUA_Achr11P... | Banana | nucleus | 35.24 | 33.64 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 31.11 | 32.34 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 31.11 | 32.34 |
| CDY41479 | Canola | nucleus | 29.21 | 32.17 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 30.79 | 32.01 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 30.48 | 32.0 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 31.11 | 31.51 |
| CDX91680 | Canola | nucleus | 27.94 | 30.77 |
| CDY37820 | Canola | nucleus | 20.95 | 30.28 |
| CDY12528 | Canola | nucleus | 26.98 | 30.14 |
| CDY50447 | Canola | nucleus | 30.16 | 29.32 |
| CDX68274 | Canola | nucleus | 30.16 | 29.32 |
| Zm00001d027419_P001 | Maize | nucleus | 28.89 | 29.26 |
| CDY21365 | Canola | nucleus | 27.94 | 29.24 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 33.97 | 29.23 |
| Zm00001d048478_P001 | Maize | nucleus | 29.84 | 29.01 |
| CDY04811 | Canola | nucleus | 27.62 | 28.9 |
| CDY03201 | Canola | cytosol | 16.51 | 28.73 |
| CDY46652 | Canola | nucleus | 25.71 | 28.72 |
| CDX96382 | Canola | nucleus | 29.52 | 28.62 |
| CDY03650 | Canola | nucleus | 29.52 | 28.53 |
| CDX82171 | Canola | nucleus | 29.52 | 28.53 |
| OQU93358 | Sorghum | nucleus | 29.21 | 28.48 |
| CDX72877 | Canola | nucleus | 28.89 | 27.74 |
| CDY65719 | Canola | nucleus | 26.35 | 27.57 |
| CDY41734 | Canola | nucleus | 26.03 | 27.24 |
| CDY35175 | Canola | nucleus | 25.4 | 27.21 |
| CDY33966 | Canola | nucleus | 25.71 | 26.82 |
| CDX77682 | Canola | nucleus | 27.3 | 26.54 |
| CDY63053 | Canola | nucleus | 27.3 | 26.54 |
| CDX77460 | Canola | nucleus | 25.4 | 22.47 |
| CDX85167 | Canola | nucleus | 27.3 | 22.11 |
| CDX92996 | Canola | nucleus | 27.3 | 21.23 |
| CDX94841 | Canola | nucleus | 26.98 | 20.83 |
| CDY19692 | Canola | nucleus | 23.17 | 20.68 |
| CDY14397 | Canola | nucleus | 23.17 | 20.56 |
| CDY47059 | Canola | nucleus | 22.54 | 20.34 |
| CDY38734 | Canola | nucleus | 22.22 | 19.83 |
| CDX96201 | Canola | nucleus | 20.95 | 18.75 |
| CDY64587 | Canola | nucleus | 21.59 | 18.33 |
| CDY18083 | Canola | nucleus | 22.22 | 18.23 |
Protein Annotations
| EnsemblPlants:CDX76598 | EnsemblPlantsGene:GSBRNA2T00127051001 | Gene3D:4.10.280.10 | GO:A0A078CNE5 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF29 | PFAM:PF00010 | PFscan:PS50888 | ProteinID:CDX76598 | ProteinID:CDX76598.1 |
| SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EDE425 | MapMan:15.5.32 | : |
Description
BnaC08g31840D
Coordinates
chrLK031808:+:116163..117633
Molecular Weight (calculated)
36183.1 Da
IEP (calculated)
8.146
GRAVY (calculated)
-0.670
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MERFQGHINP CFLDQNADGR SLEAQSFAFK EEEEEESMQN TVPFLQMLQS EEDPLPFTSF KELLSLQNLH NHWELDSYLS HNETYPVSTT SMEVTRQALS
101: SQELPFSRQQ DMTVPSSSST PNSRRKRKII SNNPPEVTRG KRRKTKPSKD IEEIENQRIN HIAVERNRRR QMNEHISSLR SLLPPSYIQR GDQASIVGGA
201: INYAKVLEQV IKSLELQKRT KQSSVVQNRV TCVPRIEATL IQNHVNLKVE CRKKQGQLLK GIVSLEKLRL TVLHLNISSL SCSSVSYCFN LKMEDDCKLE
301: SAEEITKVAH QIFDT
101: SQELPFSRQQ DMTVPSSSST PNSRRKRKII SNNPPEVTRG KRRKTKPSKD IEEIENQRIN HIAVERNRRR QMNEHISSLR SLLPPSYIQR GDQASIVGGA
201: INYAKVLEQV IKSLELQKRT KQSSVVQNRV TCVPRIEATL IQNHVNLKVE CRKKQGQLLK GIVSLEKLRL TVLHLNISSL SCSSVSYCFN LKMEDDCKLE
301: SAEEITKVAH QIFDT
001: MERFQGHINP CFFDRKPDVR SLEVQGFAEA QSFAFKEKEE ESLQDTVPFL QMLQSEDPSS FFSIKEPNFL TLLSLQTLKE PWELERYLSL EDSQFHSPVQ
101: SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA
201: LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK
301: GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH RIFDIPTI
101: SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA
201: LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK
301: GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH RIFDIPTI
Arabidopsis Description
BHLH67Transcription factor bHLH67 [Source:UniProtKB/Swiss-Prot;Acc:Q700E4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.