Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040483.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY27521 | Canola | nucleus | 85.53 | 87.74 |
| CDY41561 | Canola | nucleus | 68.87 | 70.19 |
| CDX80049 | Canola | nucleus | 68.55 | 69.65 |
| AT2G46810.1 | Thale cress | nucleus | 72.33 | 61.99 |
| CDY11386 | Canola | nucleus | 43.4 | 49.46 |
| CDX76598 | Canola | nucleus | 45.91 | 46.35 |
| CDY68483 | Canola | nucleus | 44.97 | 44.69 |
| CDY55926 | Canola | nucleus | 45.28 | 44.58 |
| CDY55929 | Canola | nucleus | 42.77 | 40.72 |
| CDY37634 | Canola | nucleus | 27.99 | 39.04 |
| CDY51710 | Canola | nucleus | 36.48 | 37.3 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 41.82 | 36.84 |
| CDY07143 | Canola | nucleus | 35.85 | 36.77 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 33.65 | 36.64 |
| GSMUA_Achr11P... | Banana | nucleus | 32.39 | 36.14 |
| KRH47774 | Soybean | nucleus | 41.82 | 34.64 |
| CDY24717 | Canola | nucleus | 21.7 | 34.33 |
| CDY18843 | Canola | nucleus | 21.7 | 34.33 |
| CDY05233 | Canola | nucleus | 22.01 | 34.31 |
| CDY41479 | Canola | nucleus | 30.82 | 34.27 |
| CDY58338 | Canola | nucleus | 22.01 | 33.82 |
| CDY08066 | Canola | nucleus | 22.01 | 33.82 |
| KRH06347 | Soybean | nucleus | 41.51 | 33.17 |
| CDX91680 | Canola | nucleus | 29.56 | 32.87 |
| GSMUA_Achr11P... | Banana | nucleus | 33.96 | 32.73 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 31.76 | 32.48 |
| Zm00001d027419_P001 | Maize | nucleus | 31.45 | 32.15 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 30.19 | 32.0 |
| CDY04811 | Canola | nucleus | 30.19 | 31.89 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 30.19 | 31.68 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 30.19 | 31.68 |
| CDY21365 | Canola | nucleus | 29.87 | 31.56 |
| CDY12528 | Canola | nucleus | 27.67 | 31.21 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 29.56 | 31.02 |
| OQU93358 | Sorghum | nucleus | 31.45 | 30.96 |
| Zm00001d048478_P001 | Maize | nucleus | 31.45 | 30.86 |
| CDY46652 | Canola | nucleus | 26.42 | 29.79 |
| CDY37820 | Canola | nucleus | 20.13 | 29.36 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 33.65 | 29.23 |
| CDY03650 | Canola | nucleus | 29.87 | 29.14 |
| CDY50447 | Canola | nucleus | 29.56 | 29.01 |
| CDX68274 | Canola | nucleus | 29.56 | 29.01 |
| CDX96382 | Canola | nucleus | 29.56 | 28.92 |
| CDX82171 | Canola | nucleus | 29.56 | 28.83 |
| CDY03201 | Canola | cytosol | 16.35 | 28.73 |
| CDX72877 | Canola | nucleus | 29.56 | 28.66 |
| CDY65719 | Canola | nucleus | 26.42 | 27.91 |
| CDY41734 | Canola | nucleus | 26.1 | 27.57 |
| CDY35175 | Canola | nucleus | 25.47 | 27.55 |
| CDX77682 | Canola | nucleus | 27.99 | 27.47 |
| CDY63053 | Canola | nucleus | 27.67 | 27.16 |
| CDY33966 | Canola | nucleus | 24.53 | 25.83 |
| CDX77460 | Canola | nucleus | 24.84 | 22.19 |
| CDX85167 | Canola | nucleus | 27.04 | 22.11 |
| CDX92996 | Canola | nucleus | 27.67 | 21.73 |
| CDX94841 | Canola | nucleus | 27.36 | 21.32 |
| CDY38734 | Canola | nucleus | 22.96 | 20.68 |
| CDY19692 | Canola | nucleus | 22.64 | 20.4 |
| CDY14397 | Canola | nucleus | 22.64 | 20.28 |
| CDY47059 | Canola | nucleus | 22.01 | 20.06 |
| CDY18083 | Canola | nucleus | 22.96 | 19.01 |
| CDY64587 | Canola | nucleus | 22.01 | 18.87 |
| CDX96201 | Canola | nucleus | 20.44 | 18.47 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078IFU7 | UniProt:A0A078IFU7 | EnsemblPlants:CDY48013 | ProteinID:CDY48013 |
| ProteinID:CDY48013.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00088659001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11969 |
| PANTHER:PTHR11969:SF29 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002544816 | InterPro:bHLH_dom | SEG:seg |
Description
BnaA04g26770DBnaA04g26770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFU7]
Coordinates
chrLK032749:-:67411..68731
Molecular Weight (calculated)
36732.8 Da
IEP (calculated)
8.229
GRAVY (calculated)
-0.556
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MWTCIFTPSP NELHSVLVDL LDQKVNVRRS LQVQASPEDH SFPLEEDQYS TLTLQGTRLP FQQMLQDPSS VLSFKDPHIL GNYLPYEVPE FHSPFHSDNN
101: HYYQNPFLEG TNEDISSQEL QLNPVDNAFS RRKLRNNNLA ASVSREKRKR RRSKPMKNRE EMESQKRMTH IAVERNRRRQ MNVHLNSLRS LIPSSYFLRG
201: DQASIVGGAI DFVKILEQHL QSLEAQKITQ QTSKLIIDAT VTERHVSLKI QYCQRKQGQL LRSIFLLEKL GLTVLHLNVT SPCNASVSYS FNLKMEEDCN
301: LGSVDEITAA VRQIFDYC
101: HYYQNPFLEG TNEDISSQEL QLNPVDNAFS RRKLRNNNLA ASVSREKRKR RRSKPMKNRE EMESQKRMTH IAVERNRRRQ MNVHLNSLRS LIPSSYFLRG
201: DQASIVGGAI DFVKILEQHL QSLEAQKITQ QTSKLIIDAT VTERHVSLKI QYCQRKQGQL LRSIFLLEKL GLTVLHLNVT SPCNASVSYS FNLKMEEDCN
301: LGSVDEITAA VRQIFDYC
001: MERSIQGQNK LCCLDQKVNV RRSLQVQETV EDHQSFALEE EEQQLSTPSL LQDTTIPFLQ MLQQSEDPSP FLSFKDPSFL ALLSLQTLEK PWELENYLPH
101: EVPEFHSPIH SETNHYYHNP SLEGVNEAIS NQELPFNPLE NARSRRKRKN NNLASLMTRE KRKRRRTKPT KNIEEIESQR MTHIAVERNR RRQMNVHLNS
201: LRSIIPSSYI QRGDQASIVG GAIDFVKILE QQLQSLEAQK RSQQSDDNKE QIPEDNSLRN ISSNKLRASN KEEQSSKLKI EATVIESHVN LKIQCTRKQG
301: QLLRSIILLE KLRFTVLHLN ITSPTNTSVS YSFNLKMEDE CNLGSADEIT AAIRQIFDS
101: EVPEFHSPIH SETNHYYHNP SLEGVNEAIS NQELPFNPLE NARSRRKRKN NNLASLMTRE KRKRRRTKPT KNIEEIESQR MTHIAVERNR RRQMNVHLNS
201: LRSIIPSSYI QRGDQASIVG GAIDFVKILE QQLQSLEAQK RSQQSDDNKE QIPEDNSLRN ISSNKLRASN KEEQSSKLKI EATVIESHVN LKIQCTRKQG
301: QLLRSIILLE KLRFTVLHLN ITSPTNTSVS YSFNLKMEDE CNLGSADEIT AAIRQIFDS
Arabidopsis Description
BHLH70Transcription factor bHLH70 [Source:UniProtKB/Swiss-Prot;Acc:O81037]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.