Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016080.1-P | Field mustard | nucleus | 99.08 | 99.08 |
| CDX72877 | Canola | nucleus | 95.38 | 94.51 |
| CDY37634 | Canola | nucleus | 65.85 | 93.86 |
| CDY50447 | Canola | nucleus | 81.85 | 82.1 |
| AT1G72210.1 | Thale cress | nucleus | 80.62 | 81.88 |
| CDX68274 | Canola | nucleus | 81.23 | 81.48 |
| CDX82171 | Canola | nucleus | 77.23 | 76.99 |
| CDY03650 | Canola | nucleus | 76.62 | 76.38 |
| CDY41479 | Canola | nucleus | 58.46 | 66.43 |
| CDX91680 | Canola | nucleus | 57.23 | 65.03 |
| CDY04811 | Canola | nucleus | 59.38 | 64.12 |
| CDY21365 | Canola | nucleus | 59.08 | 63.79 |
| CDY12528 | Canola | nucleus | 54.77 | 63.12 |
| CDY46652 | Canola | nucleus | 53.54 | 61.7 |
| VIT_18s0001g06650.t01 | Wine grape | nucleus | 50.46 | 52.9 |
| Solyc12g087850.1.1 | Tomato | nucleus | 25.54 | 51.23 |
| KRH62289 | Soybean | nucleus | 49.85 | 50.0 |
| KRH16792 | Soybean | nucleus | 48.92 | 49.07 |
| KRH53000 | Soybean | nucleus | 48.92 | 47.6 |
| PGSC0003DMT400005446 | Potato | nucleus | 48.92 | 46.09 |
| KRH72411 | Soybean | nucleus | 48.31 | 45.38 |
| PGSC0003DMT400045820 | Potato | nucleus | 41.23 | 45.27 |
| Solyc04g074810.2.1 | Tomato | extracellular | 48.62 | 44.51 |
| CDY37820 | Canola | nucleus | 26.46 | 39.45 |
| CDY65719 | Canola | nucleus | 36.31 | 39.2 |
| CDY41734 | Canola | nucleus | 36.0 | 38.87 |
| CDY03201 | Canola | cytosol | 21.54 | 38.67 |
| CDY63053 | Canola | nucleus | 36.92 | 37.04 |
| CDX77682 | Canola | nucleus | 36.62 | 36.73 |
| CDY33966 | Canola | nucleus | 32.92 | 35.43 |
| CDY35175 | Canola | nucleus | 31.08 | 34.35 |
| CDY11386 | Canola | nucleus | 28.62 | 33.33 |
| CDY51710 | Canola | nucleus | 31.38 | 32.8 |
| CDY07143 | Canola | nucleus | 30.15 | 31.61 |
| CDY41561 | Canola | nucleus | 29.54 | 30.77 |
| CDX80049 | Canola | nucleus | 29.23 | 30.35 |
| CDY68483 | Canola | nucleus | 29.23 | 29.69 |
| CDY48013 | Canola | nucleus | 28.92 | 29.56 |
| CDX76598 | Canola | nucleus | 28.62 | 29.52 |
| CDY24717 | Canola | nucleus | 18.15 | 29.35 |
| CDY55926 | Canola | nucleus | 28.62 | 28.79 |
| CDY05233 | Canola | nucleus | 17.85 | 28.43 |
| CDY27521 | Canola | nucleus | 27.08 | 28.39 |
| CDY08066 | Canola | nucleus | 17.85 | 28.02 |
| CDY58338 | Canola | nucleus | 17.85 | 28.02 |
| CDY18843 | Canola | nucleus | 16.92 | 27.36 |
| CDY55929 | Canola | nucleus | 27.08 | 26.35 |
| CDX85167 | Canola | nucleus | 30.15 | 25.19 |
| CDX77460 | Canola | nucleus | 27.08 | 24.72 |
| CDX92996 | Canola | nucleus | 30.46 | 24.44 |
| CDX94841 | Canola | nucleus | 29.85 | 23.77 |
| CDY18083 | Canola | nucleus | 26.15 | 22.14 |
| CDY19692 | Canola | nucleus | 24.0 | 22.1 |
| CDY47059 | Canola | nucleus | 23.69 | 22.06 |
| CDY14397 | Canola | nucleus | 24.0 | 21.97 |
| CDY64587 | Canola | nucleus | 24.92 | 21.83 |
| CDY38734 | Canola | nucleus | 23.38 | 21.53 |
| CDX96201 | Canola | nucleus | 22.15 | 20.45 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078E5K7 | EnsemblPlants:CDX96382 | ProteinID:CDX96382 | ProteinID:CDX96382.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00102536001 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF26 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEFECC | InterPro:bHLH_dom | SEG:seg | : |
Description
BnaA07g29930D
Coordinates
chrLK031894:+:580595..585351
Molecular Weight (calculated)
36305.6 Da
IEP (calculated)
6.114
GRAVY (calculated)
-0.669
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEAVVYLQ DPLSYSSCKD FPFHDLYFQQ GEDQDPLDTK NNIKLGQEQR QGFGSINYNG KGGDNSVDYS YNDQVDLQWP LHELPYGSTV DTKNHPPPSD
101: MAATGGERKK RRRTRSNKNK EEIENQRMTH IAVERNRRKQ MNEYLAALRS LMPPCYSQRG DQASIVGGAI NYLKELEHQL QSMEPQVKTT ATKETGSTVG
201: DKNNTITASS SGPFSDFFAF PQYSSRPSSS SVAEGTAEIE VTMVESHASV KILAKKRPKQ LLKLVASIQS LRLTLLHLNV TTHDDSVLYS ISLKVEEGSQ
301: LNTVEDIAAA VNQILMRIEE ESPLS
101: MAATGGERKK RRRTRSNKNK EEIENQRMTH IAVERNRRKQ MNEYLAALRS LMPPCYSQRG DQASIVGGAI NYLKELEHQL QSMEPQVKTT ATKETGSTVG
201: DKNNTITASS SGPFSDFFAF PQYSSRPSSS SVAEGTAEIE VTMVESHASV KILAKKRPKQ LLKLVASIQS LRLTLLHLNV TTHDDSVLYS ISLKVEEGSQ
301: LNTVEDIAAA VNQILMRIEE ESPLS
001: MALEAVVYPQ DPFSYISCKD FPFYDLYFQE EEDQDPQDTK NNIKLGQGQG HGFASNNYNG RTGDYSDDYN YNEEDLQWPR DLPYGSAVDT ESQPPPSDVA
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS
Arabidopsis Description
BHLH96Transcription factor bHLH96 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.