Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62289 | Soybean | nucleus | 90.12 | 92.9 |
| KRH16792 | Soybean | nucleus | 70.36 | 72.53 |
| KRH72411 | Soybean | nucleus | 71.86 | 69.36 |
| Bra040856.1-P | Field mustard | nucleus | 40.12 | 61.75 |
| VIT_18s0001g06650.t01 | Wine grape | nucleus | 55.09 | 59.35 |
| CDY37634 | Canola | nucleus | 40.12 | 58.77 |
| Solyc12g087850.1.1 | Tomato | nucleus | 26.05 | 53.7 |
| CDY41479 | Canola | nucleus | 45.81 | 53.5 |
| AT1G72210.1 | Thale cress | nucleus | 50.9 | 53.12 |
| CDX91680 | Canola | nucleus | 44.91 | 52.45 |
| CDY21365 | Canola | nucleus | 47.01 | 52.16 |
| CDY04811 | Canola | nucleus | 46.71 | 51.83 |
| Bra016377.1-P | Field mustard | nucleus | 46.11 | 50.99 |
| Bra012329.1-P | Field mustard | nucleus | 46.11 | 50.83 |
| CDY12528 | Canola | nucleus | 42.81 | 50.71 |
| KRG92821 | Soybean | nucleus | 49.4 | 50.3 |
| KRG96858 | Soybean | nucleus | 50.0 | 50.3 |
| CDX68274 | Canola | nucleus | 48.5 | 50.0 |
| CDY50447 | Canola | nucleus | 48.5 | 50.0 |
| Bra003886.1-P | Field mustard | nucleus | 48.2 | 49.69 |
| CDY46652 | Canola | nucleus | 41.92 | 49.65 |
| PGSC0003DMT400005446 | Potato | nucleus | 50.6 | 48.99 |
| CDX96382 | Canola | nucleus | 47.6 | 48.92 |
| Bra016080.1-P | Field mustard | nucleus | 47.6 | 48.92 |
| KRH33976 | Soybean | nucleus | 48.5 | 48.8 |
| CDX72877 | Canola | nucleus | 47.6 | 48.48 |
| PGSC0003DMT400045820 | Potato | nucleus | 42.81 | 48.31 |
| Bra008017.1-P | Field mustard | nucleus | 47.01 | 48.16 |
| KRH68589 | Soybean | nucleus | 49.4 | 48.1 |
| Solyc04g074810.2.1 | Tomato | extracellular | 50.9 | 47.89 |
| CDY03650 | Canola | nucleus | 46.71 | 47.85 |
| CDX82171 | Canola | nucleus | 46.71 | 47.85 |
| KRH45428 | Soybean | nucleus | 39.82 | 43.89 |
| KRH75598 | Soybean | nucleus | 39.82 | 43.89 |
| AT1G22490.2 | Thale cress | nucleus | 42.81 | 43.87 |
| KRH11385 | Soybean | cytosol | 24.25 | 42.41 |
| KRH20902 | Soybean | cytosol | 23.95 | 41.88 |
| KRH47774 | Soybean | nucleus | 36.53 | 31.77 |
| KRH06347 | Soybean | nucleus | 37.13 | 31.16 |
| KRH64504 | Soybean | nucleus | 28.44 | 27.62 |
| KRH16521 | Soybean | nucleus | 27.25 | 27.49 |
| KRH18131 | Soybean | nucleus | 27.25 | 27.08 |
| KRH53438 | Soybean | nucleus | 27.84 | 26.65 |
| KRH75571 | Soybean | nucleus | 33.23 | 25.87 |
| KRH71094 | Soybean | nucleus | 32.34 | 24.22 |
Protein Annotations
| EntrezGene:100789380 | MapMan:15.5.32 | Gene3D:4.10.280.10 | InterPro:ACT_dom | EMBL:ACUP02003444 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_06G100000 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| UniProt:I1K9U4 | InterPro:IPR002912 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH53000 | ProteinID:KRH53000 |
| ProteinID:KRH53000.1 | PFAM:PF00010 | PFscan:PS50888 | PFscan:PS51671 | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF26 |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000233943D | InterPro:bHLH_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:+:7950498..7952588
Molecular Weight (calculated)
37284.2 Da
IEP (calculated)
6.683
GRAVY (calculated)
-0.439
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEAVVFPQ DPFAYGCNKD YLYSLVGATP NYGNFQAAEE EKVLLGIINN NIEHNLYANW DSSSTSMLQN VKEQQWDSHS SPEACTVEQS VTTPSFPPPP
101: PPSSSVEATV TTTSRRKRRR TKSAKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP SSYVQRGDQA SIIGGAINFV KELEQLLQSM EGQKRTNQGK
201: ENVVGLNGTS RTTTTTPFAE FFAFPQYTTR GTTMAQNNQE QKQWAVADIE VTMVDNHANL KVLSKKQPGQ IMKIVVGLQS LKLSILHLNV STLDDMVLYS
301: VSVKVEDGCL LNTVDEIAAA VNQLLRTIQE VTFS
101: PPSSSVEATV TTTSRRKRRR TKSAKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP SSYVQRGDQA SIIGGAINFV KELEQLLQSM EGQKRTNQGK
201: ENVVGLNGTS RTTTTTPFAE FFAFPQYTTR GTTMAQNNQE QKQWAVADIE VTMVDNHANL KVLSKKQPGQ IMKIVVGLQS LKLSILHLNV STLDDMVLYS
301: VSVKVEDGCL LNTVDEIAAA VNQLLRTIQE VTFS
001: MALEAVVYPQ DPFSYISCKD FPFYDLYFQE EEDQDPQDTK NNIKLGQGQG HGFASNNYNG RTGDYSDDYN YNEEDLQWPR DLPYGSAVDT ESQPPPSDVA
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS
Arabidopsis Description
BHLH96Transcription factor bHLH96 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.