Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001183.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY58338 | Canola | nucleus | 100.0 | 100.0 |
| AT3G06120.1 | Thale cress | nucleus | 92.27 | 94.55 |
| CDY18843 | Canola | nucleus | 91.3 | 94.03 |
| CDY24717 | Canola | nucleus | 87.92 | 90.55 |
| CDY05233 | Canola | nucleus | 87.44 | 88.73 |
| VIT_05s0020g02700.t01 | Wine grape | nucleus | 62.8 | 68.42 |
| KRH20902 | Soybean | cytosol | 61.35 | 66.49 |
| KRH11385 | Soybean | cytosol | 60.87 | 65.97 |
| Solyc01g080050.2.1 | Tomato | nucleus | 60.39 | 64.1 |
| GSMUA_Achr7P21110_001 | Banana | nucleus | 59.42 | 64.06 |
| GSMUA_Achr7P21190_001 | Banana | nucleus | 59.42 | 62.12 |
| Zm00001d009778_P001 | Maize | nucleus | 57.0 | 53.88 |
| KXG22733 | Sorghum | nucleus | 57.0 | 49.58 |
| TraesCS2A01G120700.1 | Wheat | nucleus | 50.24 | 48.15 |
| TraesCS2D01G122800.1 | Wheat | nucleus | 49.76 | 47.91 |
| Os05t0597000-00 | Rice | nucleus | 52.17 | 47.58 |
| TraesCS2B01G141600.1 | Wheat | plastid | 50.24 | 43.7 |
| HORVU2Hr1G020990.1 | Barley | nucleus | 49.28 | 42.86 |
| CDY19692 | Canola | nucleus | 47.83 | 28.05 |
| CDY14397 | Canola | nucleus | 47.83 | 27.89 |
| CDY47059 | Canola | nucleus | 46.38 | 27.51 |
| CDY38734 | Canola | nucleus | 46.38 | 27.2 |
| CDY37634 | Canola | nucleus | 28.5 | 25.88 |
| CDY11386 | Canola | nucleus | 34.3 | 25.45 |
| CDX96201 | Canola | nucleus | 42.51 | 25.0 |
| CDY51710 | Canola | nucleus | 35.75 | 23.79 |
| CDY07143 | Canola | nucleus | 34.3 | 22.9 |
| CDX76598 | Canola | nucleus | 34.78 | 22.86 |
| CDY03201 | Canola | cytosol | 19.81 | 22.65 |
| CDX77460 | Canola | nucleus | 38.16 | 22.19 |
| CDX85167 | Canola | nucleus | 41.55 | 22.11 |
| CDX80049 | Canola | nucleus | 33.33 | 22.04 |
| CDY48013 | Canola | nucleus | 33.82 | 22.01 |
| CDY68483 | Canola | nucleus | 33.82 | 21.88 |
| CDY27521 | Canola | nucleus | 32.37 | 21.61 |
| CDY55926 | Canola | nucleus | 33.33 | 21.36 |
| CDY41561 | Canola | nucleus | 31.88 | 21.15 |
| CDX92996 | Canola | nucleus | 41.06 | 20.99 |
| CDX94841 | Canola | nucleus | 41.06 | 20.83 |
| CDY37820 | Canola | nucleus | 20.77 | 19.72 |
| CDY64587 | Canola | nucleus | 34.78 | 19.41 |
| CDY18083 | Canola | nucleus | 35.75 | 19.27 |
| CDY65719 | Canola | nucleus | 28.02 | 19.27 |
| CDY41734 | Canola | nucleus | 28.02 | 19.27 |
| CDY63053 | Canola | nucleus | 29.95 | 19.14 |
| CDY41479 | Canola | nucleus | 26.09 | 18.88 |
| CDX91680 | Canola | nucleus | 26.09 | 18.88 |
| CDX77682 | Canola | nucleus | 29.47 | 18.83 |
| CDY46652 | Canola | nucleus | 25.6 | 18.79 |
| CDY35175 | Canola | nucleus | 26.57 | 18.71 |
| CDY21365 | Canola | nucleus | 27.05 | 18.6 |
| CDY04811 | Canola | nucleus | 27.05 | 18.6 |
| CDY12528 | Canola | nucleus | 25.12 | 18.44 |
| CDY55929 | Canola | nucleus | 29.47 | 18.26 |
| CDX72877 | Canola | nucleus | 28.5 | 17.99 |
| CDX96382 | Canola | nucleus | 28.02 | 17.85 |
| CDY33966 | Canola | nucleus | 25.6 | 17.55 |
| CDY50447 | Canola | nucleus | 27.05 | 17.28 |
| CDX68274 | Canola | nucleus | 27.05 | 17.28 |
| CDX82171 | Canola | nucleus | 27.05 | 17.18 |
| CDY03650 | Canola | nucleus | 27.05 | 17.18 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078F411 | UniProt:A0A078F411 | EnsemblPlants:CDY08066 | ProteinID:CDY08066 |
| ProteinID:CDY08066.1 | ProteinID:CDY58338.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00125324001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 |
| PFscan:PS50888 | PANTHER:PTHR45509 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002540AA8 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g34570DBnaA03g57400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F411]
Coordinates
chrLK031982:-:970704..971732
Molecular Weight (calculated)
23374.6 Da
IEP (calculated)
9.599
GRAVY (calculated)
-0.057
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVVEFIKELQ QLVQVLESKK RRKTLNRPSF PYDHQTLEPS ILAAAATTTN TTTRVPFSRI
101: ENVMTTSTFK EVGACCNSPH ANVEAKISGS NVVLRVVSRR IEGQLVRIIS VLEKLSLQVL HLNISSMEET VLYFFVVKIG LECHLSLEDL TLEVQKSFVP
201: EVIVPTN
101: ENVMTTSTFK EVGACCNSPH ANVEAKISGS NVVLRVVSRR IEGQLVRIIS VLEKLSLQVL HLNISSMEET VLYFFVVKIG LECHLSLEDL TLEVQKSFVP
201: EVIVPTN
001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKELQ QLVQVLESKK RRKTLNRPSF PYDHQTIEPS SLGAATTRVP FSRIENVMTT
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN
Arabidopsis Description
MUTETranscription factor MUTE [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.