Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55926 | Canola | nucleus | 95.31 | 94.43 |
| CDY55929 | Canola | nucleus | 88.75 | 85.03 |
| CDY11386 | Canola | nucleus | 60.94 | 69.89 |
| CDX76598 | Canola | nucleus | 67.5 | 68.57 |
| AT3G61950.1 | Thale cress | nucleus | 72.5 | 64.8 |
| CDY41561 | Canola | nucleus | 47.19 | 48.4 |
| CDY27521 | Canola | nucleus | 46.56 | 48.06 |
| CDX80049 | Canola | nucleus | 46.88 | 47.92 |
| CDY48013 | Canola | nucleus | 44.69 | 44.97 |
| CDY07143 | Canola | nucleus | 40.0 | 41.29 |
| CDY51710 | Canola | nucleus | 40.0 | 41.16 |
| CDY37634 | Canola | nucleus | 25.94 | 36.4 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 40.62 | 36.01 |
| KRH47774 | Soybean | nucleus | 42.5 | 35.42 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 32.19 | 34.33 |
| CDY24717 | Canola | nucleus | 21.56 | 34.33 |
| CDY18843 | Canola | nucleus | 21.56 | 34.33 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 32.5 | 34.32 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 32.5 | 34.32 |
| CDY05233 | Canola | nucleus | 21.88 | 34.31 |
| CDY41479 | Canola | nucleus | 30.62 | 34.27 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 32.19 | 33.99 |
| KRH06347 | Soybean | nucleus | 42.19 | 33.92 |
| CDY08066 | Canola | nucleus | 21.88 | 33.82 |
| CDY58338 | Canola | nucleus | 21.88 | 33.82 |
| GSMUA_Achr11P... | Banana | nucleus | 30.0 | 33.68 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 30.62 | 33.56 |
| CDX91680 | Canola | nucleus | 29.38 | 32.87 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 31.56 | 32.48 |
| Zm00001d027419_P001 | Maize | nucleus | 31.25 | 32.15 |
| CDY04811 | Canola | nucleus | 30.0 | 31.89 |
| GSMUA_Achr11P... | Banana | nucleus | 32.5 | 31.52 |
| CDY21365 | Canola | nucleus | 29.38 | 31.23 |
| CDY12528 | Canola | nucleus | 27.5 | 31.21 |
| OQU93358 | Sorghum | nucleus | 31.25 | 30.96 |
| Zm00001d048478_P001 | Maize | nucleus | 30.94 | 30.56 |
| CDX68274 | Canola | nucleus | 30.31 | 29.94 |
| CDY50447 | Canola | nucleus | 30.31 | 29.94 |
| CDY46652 | Canola | nucleus | 26.25 | 29.79 |
| CDX96382 | Canola | nucleus | 29.69 | 29.23 |
| CDX72877 | Canola | nucleus | 29.38 | 28.66 |
| CDY37820 | Canola | nucleus | 19.38 | 28.44 |
| CDX82171 | Canola | nucleus | 28.75 | 28.22 |
| CDY03650 | Canola | nucleus | 28.44 | 27.91 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 31.88 | 27.87 |
| CDY65719 | Canola | nucleus | 25.62 | 27.24 |
| CDY41734 | Canola | nucleus | 25.31 | 26.91 |
| CDY63053 | Canola | nucleus | 26.25 | 25.93 |
| CDX77682 | Canola | nucleus | 26.25 | 25.93 |
| CDY35175 | Canola | nucleus | 23.44 | 25.51 |
| CDY03201 | Canola | cytosol | 14.38 | 25.41 |
| CDY33966 | Canola | nucleus | 23.75 | 25.17 |
| CDX77460 | Canola | nucleus | 25.94 | 23.31 |
| CDX85167 | Canola | nucleus | 27.5 | 22.62 |
| CDX92996 | Canola | nucleus | 26.88 | 21.23 |
| CDX94841 | Canola | nucleus | 26.88 | 21.08 |
| CDY19692 | Canola | nucleus | 22.81 | 20.68 |
| CDY14397 | Canola | nucleus | 22.81 | 20.56 |
| CDY47059 | Canola | nucleus | 21.88 | 20.06 |
| CDY38734 | Canola | nucleus | 21.56 | 19.55 |
| CDX96201 | Canola | nucleus | 20.31 | 18.47 |
| CDY18083 | Canola | nucleus | 21.56 | 17.97 |
| CDY64587 | Canola | nucleus | 20.62 | 17.79 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078JLU3 | UniProt:A0A078JLU3 | EnsemblPlants:CDY68483 | ProteinID:CDY68483 |
| ProteinID:CDY68483.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00074800001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF29 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0004EEABEB | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g27520DBnaA04g27520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JLU3]
Coordinates
chrLK037408:+:2563..4092
Molecular Weight (calculated)
36921.9 Da
IEP (calculated)
6.430
GRAVY (calculated)
-0.652
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MESFQGHINP CYLDRKADAR SLEVQEFAEA QSFSFKEEED QDTVPFLQML QSEEPSFLRL LSLQNLKEPW EVESFLSQEG YPHLYQNQVS ASYMEGAKQP
101: LSSQEADMIL LPSSSPQHKR KNSDLLAPDM TREKRKRRKT KPSKNIEEIE SQRISHIVVE RNRRRQMNEH VNSLRSLLPP SYIQRGDQAS IVGGAINYAK
201: VLEQIIQSLE SQKKTQQSSE VENRVQEDET CVPSIETTVI QNHVNLRVVC RKRQGGLIRG IISLEKLRLT VLHLNISTLS HFYVSYCFNL KMEDGCELES
301: ADEIKKVAHQ IFDMPMNLNN
101: LSSQEADMIL LPSSSPQHKR KNSDLLAPDM TREKRKRRKT KPSKNIEEIE SQRISHIVVE RNRRRQMNEH VNSLRSLLPP SYIQRGDQAS IVGGAINYAK
201: VLEQIIQSLE SQKKTQQSSE VENRVQEDET CVPSIETTVI QNHVNLRVVC RKRQGGLIRG IISLEKLRLT VLHLNISTLS HFYVSYCFNL KMEDGCELES
301: ADEIKKVAHQ IFDMPMNLNN
001: MERFQGHINP CFFDRKPDVR SLEVQGFAEA QSFAFKEKEE ESLQDTVPFL QMLQSEDPSS FFSIKEPNFL TLLSLQTLKE PWELERYLSL EDSQFHSPVQ
101: SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA
201: LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK
301: GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH RIFDIPTI
101: SETNRFMEGA NQAVSSQEIP FSQANMTLPS STSSPLSAHS RRKRKINHLL PQEMTREKRK RRKTKPSKNN EEIENQRINH IAVERNRRRQ MNEHINSLRA
201: LLPPSYIQRG DQASIVGGAI NYVKVLEQII QSLESQKRTQ QQSNSEVVEN ALNHLSGISS NDLWTTLEDQ TCIPKIEATV IQNHVSLKVQ CEKKQGQLLK
301: GIISLEKLKL TVLHLNITTS SHSSVSYSFN LKMEDECDLE SADEITAAVH RIFDIPTI
Arabidopsis Description
BHLH67Transcription factor bHLH67 [Source:UniProtKB/Swiss-Prot;Acc:Q700E4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.