Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G347100.1 | Wheat | extracellular | 97.03 | 98.0 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 97.69 | 97.69 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 95.05 | 95.05 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 80.2 | 78.14 |
| Zm00001d027419_P001 | Maize | nucleus | 73.93 | 72.03 |
| OQU93358 | Sorghum | nucleus | 74.26 | 69.66 |
| Zm00001d048478_P001 | Maize | nucleus | 69.97 | 65.43 |
| GSMUA_Achr11P... | Banana | nucleus | 39.6 | 42.11 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 40.26 | 41.78 |
| GSMUA_Achr11P... | Banana | nucleus | 43.89 | 40.3 |
| Bra037414.1-P | Field mustard | nucleus | 36.3 | 35.37 |
| CDY51710 | Canola | nucleus | 36.3 | 35.37 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 42.57 | 35.25 |
| CDY07143 | Canola | nucleus | 35.97 | 35.16 |
| AT4G01460.2 | Thale cress | nucleus | 34.65 | 33.33 |
| Bra004505.1-P | Field mustard | nucleus | 29.7 | 33.21 |
| CDY11386 | Canola | nucleus | 30.03 | 32.62 |
| Bra007644.1-P | Field mustard | nucleus | 29.7 | 32.26 |
| CDY68483 | Canola | nucleus | 33.99 | 32.19 |
| CDY27521 | Canola | nucleus | 32.67 | 31.94 |
| CDY55926 | Canola | nucleus | 33.33 | 31.27 |
| TraesCS2D01G122800.1 | Wheat | nucleus | 22.11 | 31.16 |
| CDX76598 | Canola | nucleus | 32.01 | 30.79 |
| CDY41561 | Canola | nucleus | 31.35 | 30.45 |
| CDX80049 | Canola | nucleus | 31.35 | 30.35 |
| TraesCS4D01G302700.1 | Wheat | nucleus | 30.36 | 29.68 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 35.31 | 29.64 |
| Bra040483.1-P | Field mustard | nucleus | 31.02 | 29.56 |
| CDY48013 | Canola | nucleus | 31.02 | 29.56 |
| TraesCS6D01G294900.1 | Wheat | nucleus | 30.69 | 29.15 |
| CDY55929 | Canola | nucleus | 32.01 | 29.04 |
| KRH47774 | Soybean | nucleus | 36.63 | 28.91 |
| AT3G61950.1 | Thale cress | nucleus | 33.33 | 28.21 |
| TraesCS2D01G448000.1 | Wheat | nucleus | 30.69 | 28.1 |
| AT2G46810.1 | Thale cress | nucleus | 33.99 | 27.76 |
| TraesCS6D01G250700.1 | Wheat | nucleus | 31.68 | 27.67 |
| KRH06347 | Soybean | nucleus | 35.97 | 27.39 |
| TraesCS5D01G255100.1 | Wheat | nucleus | 30.36 | 27.38 |
| TraesCS6D01G315200.1 | Wheat | nucleus | 29.7 | 26.32 |
| TraesCS1D01G289400.1 | Wheat | nucleus | 24.75 | 17.9 |
| TraesCS7D01G327900.1 | Wheat | nucleus | 20.79 | 17.31 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G342000.1 | EnsemblPlantsGene:TraesCS4D01G342000 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF20 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | TIGR:cd00083 | MapMan:15.5.32 | : | : | : |
Description
No Description!
Coordinates
chr4D:-:498684564..498686829
Molecular Weight (calculated)
31947.5 Da
IEP (calculated)
8.402
GRAVY (calculated)
-0.020
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MERMQLQGPI ITSLCWADQA AASASAAQVP FLALLQGAAM GDGGPGVKRE SYGAAAGFAC RPAASDVDLL ESCVTQLPAP PVVEALAAKR RKRPRTRPRA
101: PPPEKRKKPE EAECQRMTHI AVERNRRRLM NDHLASLRAL IPSDYIPRGD QATVVGGAID YVKQLEQQLV ALQALAAAHR GEGPVGTAAT AASDGVFVSP
201: QYTSFSQAGG VGGGVDVEAM AAVGGHVRVR VAGRRWPGRL VRAVAAMENL RMAVLHLAVT SVGHDAVVYC FNLKMEDGCE VSTADEVATV VHQIFAYAAG
301: SCC
101: PPPEKRKKPE EAECQRMTHI AVERNRRRLM NDHLASLRAL IPSDYIPRGD QATVVGGAID YVKQLEQQLV ALQALAAAHR GEGPVGTAAT AASDGVFVSP
201: QYTSFSQAGG VGGGVDVEAM AAVGGHVRVR VAGRRWPGRL VRAVAAMENL RMAVLHLAVT SVGHDAVVYC FNLKMEDGCE VSTADEVATV VHQIFAYAAG
301: SCC
001: MFVLRVSNQS FKLHQQVQCK DEIFCLDQKV NVRRSLQVQE TVEDHQSFAL EEEEQQLSTP SLLQDTTIPF LQMLQQSEDP SPFLSFKDPS FLALLSLQTL
101: EKPWELENYL PHEVPEFHSP IHSETNHYYH NPSLEGVNEA ISNQELPFNP LENARSRRKR KNNNLASLMT REKRKRRRTK PTKNIEEIES QRMTHIAVER
201: NRRRQMNVHL NSLRSIIPSS YIQRGDQASI VGGAIDFVKI LEQQLQSLEA QKRSQQSDDN KEQIPEDNSL RNISSNKLRA SNKEEQSSKL KIEATVIESH
301: VNLKIQCTRK QGQLLRSIIL LEKLRFTVLH LNITSPTNTS VSYSFNLKME DECNLGSADE ITAAIRQIFD S
101: EKPWELENYL PHEVPEFHSP IHSETNHYYH NPSLEGVNEA ISNQELPFNP LENARSRRKR KNNNLASLMT REKRKRRRTK PTKNIEEIES QRMTHIAVER
201: NRRRQMNVHL NSLRSIIPSS YIQRGDQASI VGGAIDFVKI LEQQLQSLEA QKRSQQSDDN KEQIPEDNSL RNISSNKLRA SNKEEQSSKL KIEATVIESH
301: VNLKIQCTRK QGQLLRSIIL LEKLRFTVLH LNITSPTNTS VSYSFNLKME DECNLGSADE ITAAIRQIFD S
Arabidopsis Description
BHLH70Transcription factor bHLH70 [Source:UniProtKB/Swiss-Prot;Acc:O81037]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.