Factsheet for AT2G46810.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004505.1-P	Field mustard	nucleus	57.68	78.97
CDY41561	Canola	nucleus	63.07	75.0
CDX80049	Canola	nucleus	62.8	74.44
CDY27521	Canola	nucleus	61.46	73.55
CDY48013	Canola	nucleus	61.99	72.33
Bra040483.1-P	Field mustard	nucleus	61.99	72.33
AT3G61950.1	Thale cress	nucleus	58.49	60.61
VIT_15s0048g02510.t01	Wine grape	nucleus	43.67	44.88
AT4G01460.2	Thale cress	nucleus	36.39	42.86
KRH47774	Soybean	nucleus	43.67	42.19
GSMUA_Achr11P...	Banana	nucleus	31.0	40.35
KRH06347	Soybean	nucleus	42.86	39.95
GSMUA_Achr5P20300_001	Banana	nucleus	30.73	39.04
AT3G06120.1	Thale cress	nucleus	20.49	37.62
GSMUA_Achr11P...	Banana	nucleus	31.54	35.45
TraesCS4B01G347100.1	Wheat	extracellular	28.03	34.67
TraesCS5A01G515800.1	Wheat	extracellular	28.3	34.65
HORVU4Hr1G084850.2	Barley	extracellular	28.3	34.65
Os03t0122100-00	Rice	mitochondrion, nucleus, plastid	28.57	34.08
TraesCS4D01G342000.1	Wheat	extracellular	27.76	33.99
Zm00001d027419_P001	Maize	nucleus	28.03	33.44
Zm00001d048478_P001	Maize	nucleus	28.84	33.02
OQU93358	Sorghum	nucleus	28.03	32.2
GSMUA_Achr8P12330_001	Banana	golgi, vacuole	31.27	31.69
AT1G72210.1	Thale cress	nucleus	26.15	30.31
AT1G22490.2	Thale cress	nucleus	26.42	30.06
AT5G46690.1	Thale cress	nucleus	23.99	27.22
AT5G65320.1	Thale cress	nucleus	21.56	27.03
AT3G24140.1	Thale cress	nucleus	26.15	23.43
AT5G53210.1	Thale cress	nucleus	19.95	20.33

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:819294	ProteinID:AAC33499.1	ProteinID:AEC10757.1	EMBL:AF488602
ProteinID:ANM62693.1	ArrayExpress:AT2G46810	EnsemblPlantsGene:AT2G46810	RefSeq:AT2G46810	TAIR:AT2G46810	RefSeq:AT2G46810-TAIR-G
EnsemblPlants:AT2G46810.1	TAIR:AT2G46810.1	Unigene:At.36451	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	RefSeq:NP_001324834.1	RefSeq:NP_182204.1	UniProt:O81037	ProteinID:OAP07807.1	PFAM:PF00010
PO:PO:0000293	PFscan:PS50888	PANTHER:PTHR11969	PANTHER:PTHR11969:SF29	SMART:SM00353	SUPFAM:SSF47459
UniParc:UPI00000AB576	InterPro:bHLH_dom	SEG:seg	:	:	:

Description

BHLH70Transcription factor bHLH70 [Source:UniProtKB/Swiss-Prot;Acc:O81037]

Coordinates

chr2:+:19239694..19242672

Molecular Weight (calculated)

43003.0 Da

IEP (calculated)

7.365

GRAVY (calculated)

-0.730

Length

371 amino acids

Sequence
(BLAST)

001: MFVLRVSNQS FKLHQQVQCK DEIFCLDQKV NVRRSLQVQE TVEDHQSFAL EEEEQQLSTP SLLQDTTIPF LQMLQQSEDP SPFLSFKDPS FLALLSLQTL
101: EKPWELENYL PHEVPEFHSP IHSETNHYYH NPSLEGVNEA ISNQELPFNP LENARSRRKR KNNNLASLMT REKRKRRRTK PTKNIEEIES QRMTHIAVER
201: NRRRQMNVHL NSLRSIIPSS YIQRGDQASI VGGAIDFVKI LEQQLQSLEA QKRSQQSDDN KEQIPEDNSL RNISSNKLRA SNKEEQSSKL KIEATVIESH
301: VNLKIQCTRK QGQLLRSIIL LEKLRFTVLH LNITSPTNTS VSYSFNLKME DECNLGSADE ITAAIRQIFD S

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.