Factsheet for Bra004505.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80049	Canola	nucleus	99.26	85.94
Bra040483.1-P	Field mustard	nucleus	73.06	62.26
AT2G46810.1	Thale cress	nucleus	78.97	57.68
Bra007644.1-P	Field mustard	nucleus	52.03	50.54
Bra040856.1-P	Field mustard	nucleus	33.21	41.47
VIT_15s0048g02510.t01	Wine grape	nucleus	52.77	39.61
Bra037414.1-P	Field mustard	nucleus	42.8	37.3
KRH47774	Soybean	nucleus	50.55	35.68
GSMUA_Achr11P...	Banana	nucleus	37.27	35.44
Bra040234.1-P	Field mustard	nucleus	25.83	34.83
KRH06347	Soybean	nucleus	49.82	33.92
Bra020775.1-P	Field mustard	nucleus	25.09	33.83
Bra001183.1-P	Field mustard	nucleus	25.46	33.33
GSMUA_Achr5P20300_001	Banana	nucleus	35.79	33.22
Bra016377.1-P	Field mustard	nucleus	35.79	32.12
Os03t0122100-00	Rice	mitochondrion, nucleus, plastid	35.42	30.87
TraesCS4B01G347100.1	Wheat	extracellular	33.95	30.67
GSMUA_Achr11P...	Banana	nucleus	37.27	30.61
Zm00001d027419_P001	Maize	nucleus	35.06	30.55
TraesCS5A01G515800.1	Wheat	extracellular	33.95	30.36
HORVU4Hr1G084850.2	Barley	extracellular	33.95	30.36
Bra012329.1-P	Field mustard	nucleus	33.95	30.36
Zm00001d048478_P001	Maize	nucleus	36.16	30.25
Bra016080.1-P	Field mustard	nucleus	35.79	29.85
TraesCS4D01G342000.1	Wheat	extracellular	33.21	29.7
OQU93358	Sorghum	nucleus	35.06	29.41
Bra031865.1-P	Field mustard	nucleus	23.62	29.36
Bra003886.1-P	Field mustard	nucleus	35.06	29.32
Bra008017.1-P	Field mustard	nucleus	35.06	29.14
GSMUA_Achr8P12330_001	Banana	golgi, vacuole	38.01	28.14
Bra025007.1-P	Field mustard	nucleus	28.04	27.74
Bra017533.1-P	Field mustard	nucleus	29.15	27.34
Bra027958.1-P	Field mustard	nucleus	27.68	25.68
Bra028357.1-P	Field mustard	nucleus	30.26	20.5
Bra001929.1-P	Field mustard	nucleus	30.63	20.49
Bra029088.1-P	Field mustard	nucleus	24.35	19.64
Bra028351.1-P	Field mustard	nucleus	25.46	19.17
Bra022638.1-P	Field mustard	nucleus	24.35	18.86
Bra003073.1-P	Field mustard	nucleus	25.09	15.7

Protein Annotations

EnsemblPlants:Bra004505.1	EnsemblPlants:Bra004505.1-P	EnsemblPlantsGene:Bra004505	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
ncoils:Coil	PANTHER:PTHR11969	PANTHER:PTHR11969:SF29	PFAM:PF00010	PFscan:PS50888	SEG:seg
SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI00025472D7	UniProt:M4CJX1	MapMan:15.5.32	:

Description

AT2G46810 (E=1e-034) | basic helix-loop-helix (bHLH) family protein

Coordinates

chrA05:-:478094..479046

Molecular Weight (calculated)

31206.4 Da

IEP (calculated)

9.384

GRAVY (calculated)

-0.584

Length

271 amino acids

Sequence
(BLAST)

001: MMQQSEDLSS VLSVKDPNFL RLLSLQTLQK PWELGDYLPH EVPEFHSPTN YYHQNPSLER VNEAISSQEL QLNPLRKRRN NNNLVAASVS REKRKRKRTK
101: PTKNTEEMES QRMTHITVER NRRRQMNVYL SSLRSLIPSS YILRGDQASI VGGAIDFVKL LEQQLQSLEA QKVTQQTDTK DISLEQSSKL RIDATVIESH
201: VNLKIQCPKK QGQLLRSIIW LEKLRFTVLH LNVTSPCNAT VSYSFNLKME EDCTLTSADE ITAAVRQILD C

Best Arabidopsis Sequence Match ( AT2G46810.2 )
(BLAST)

001: MLQQSEDPSP FLSFKDPSFL ALLSLQTLEK PWELENYLPH EVPEFHSPIH SETNHYYHNP SLEGVNEAIS NQELPFNPLE NARSRRKRKN NNLASLMTRE
101: KRKRRRTKPT KNIEEIESQR MTHIAVERNR RRQMNVHLNS LRSIIPSSYI QRGDQASIVG GAIDFVKILE QQLQSLEAQK RSQQSDDNKE QIPEDNSLRN
201: ISSNKLRASN KEEQSSKLKI EATVIESHVN LKIQCTRKQG QLLRSIILLE KLRFTVLHLN ITSPTNTSVS YSFNLKMEDE CNLGSADEIT AAIRQIFDS

Arabidopsis Description

BHLH70Transcription factor bHLH70 [Source:UniProtKB/Swiss-Prot;Acc:O81037]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.