Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 63.94 | 74.04 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 77.88 | 70.22 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 59.7 | 67.47 |
| GSMUA_Achr3P06660_001 | Banana | mitochondrion, nucleus | 26.67 | 47.31 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 43.33 | 45.98 |
| Zm00001d027419_P001 | Maize | nucleus | 42.42 | 45.02 |
| GSMUA_Achr10P... | Banana | mitochondrion | 26.97 | 44.95 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 40.61 | 44.67 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 40.91 | 44.55 |
| OQU93358 | Sorghum | nucleus | 43.33 | 44.27 |
| GSMUA_Achr9P15000_001 | Banana | mitochondrion | 26.67 | 44.22 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 40.3 | 43.89 |
| TraesCS4D01G342000.1 | Wheat | extracellular | 40.3 | 43.89 |
| GSMUA_Achr11P... | Banana | mitochondrion | 24.85 | 43.39 |
| Zm00001d048478_P001 | Maize | nucleus | 41.52 | 42.28 |
| GSMUA_Achr2P22310_001 | Banana | nucleus | 28.48 | 38.84 |
| Bra037414.1-P | Field mustard | nucleus | 36.06 | 38.26 |
| CDY51710 | Canola | nucleus | 36.06 | 38.26 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 41.82 | 38.23 |
| GSMUA_Achr8P28400_001 | Banana | nucleus | 23.03 | 38.19 |
| GSMUA_Achr7P21110_001 | Banana | nucleus | 22.12 | 38.02 |
| CDY11386 | Canola | nucleus | 32.12 | 37.99 |
| Bra007644.1-P | Field mustard | nucleus | 31.82 | 37.63 |
| CDY07143 | Canola | nucleus | 35.15 | 37.42 |
| Bra004505.1-P | Field mustard | nucleus | 30.61 | 37.27 |
| GSMUA_Achr7P21190_001 | Banana | nucleus | 22.12 | 36.87 |
| AT4G01460.2 | Thale cress | nucleus | 35.15 | 36.83 |
| CDY27521 | Canola | nucleus | 33.94 | 36.13 |
| KRH47774 | Soybean | nucleus | 41.52 | 35.68 |
| CDX76598 | Canola | nucleus | 33.64 | 35.24 |
| KRH06347 | Soybean | nucleus | 41.21 | 34.17 |
| Bra040483.1-P | Field mustard | nucleus | 32.73 | 33.96 |
| CDY48013 | Canola | nucleus | 32.73 | 33.96 |
| CDY41561 | Canola | nucleus | 31.82 | 33.65 |
| GSMUA_Achr5P17900_001 | Banana | nucleus | 28.48 | 33.33 |
| GSMUA_Achr6P10290_001 | Banana | nucleus | 29.39 | 33.33 |
| CDX80049 | Canola | nucleus | 31.52 | 33.23 |
| CDY68483 | Canola | nucleus | 31.52 | 32.5 |
| CDY55926 | Canola | nucleus | 31.52 | 32.2 |
| GSMUA_Achr11P... | Banana | nucleus | 28.79 | 31.67 |
| AT2G46810.1 | Thale cress | nucleus | 35.45 | 31.54 |
| GSMUA_Achr5P05450_001 | Banana | nucleus | 27.27 | 31.36 |
| AT3G61950.1 | Thale cress | nucleus | 33.94 | 31.28 |
| GSMUA_Achr10P... | Banana | nucleus | 28.79 | 30.74 |
| GSMUA_Achr8P17650_001 | Banana | nucleus | 27.27 | 30.41 |
| GSMUA_Achr2P06030_001 | Banana | nucleus | 28.79 | 29.78 |
| GSMUA_Achr7P12790_001 | Banana | nucleus | 29.39 | 29.66 |
| CDY55929 | Canola | nucleus | 30.0 | 29.64 |
| GSMUA_Achr6P02150_001 | Banana | nucleus | 30.3 | 28.99 |
| GSMUA_Achr5P06780_001 | Banana | cytosol | 21.21 | 24.73 |
| GSMUA_Achr10P... | Banana | nucleus | 19.39 | 24.52 |
| GSMUA_Achr8P19870_001 | Banana | cytosol, golgi, nucleus | 22.42 | 23.79 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P02740_001 | EnsemblPlants:GSMUA_Achr11T02740_001 | EnsemblPlantsGene:GSMUA_Achr11G02740_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF29 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002949759 | UniProt:M0RNV4 | MapMan:15.5.32 | : |
Description
Putative Transcription factor bHLH57 [Source:GMGC_GENE;Acc:GSMUA_Achr11G02740_001]
Coordinates
chr11:+:1948896..1950178
Molecular Weight (calculated)
37615.5 Da
IEP (calculated)
6.512
GRAVY (calculated)
-0.637
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPGAASARF SEHPEMRYES LFSRQMPFLQ LLQGAMQAED ETEEEKVELQ LQQYQHQSLF TSCAQESNIE LLLRLQRQNC LEQLRTPERD KARAVEQLES
101: CITHTSEKRP RQASTSKSPE EAESQRMTHI AVERNRRRLM NDHLATLRSL MPSSYVQRGD QASIVGGAIE FVKELEHHLL SLQYEKRLRA SAAVRSRSND
201: DEQCHASTLH DGFFISPQYT GYSQWKRRRG DGKGDEAQQE NATGMDVEAT LVQGHVNLKV AGRRRRGQLV RAIAAMEELR LSVLHLNIIC LEPSSILYSL
301: NLKMEEECKL GSADEVATAV HQIFSYINAC
101: CITHTSEKRP RQASTSKSPE EAESQRMTHI AVERNRRRLM NDHLATLRSL MPSSYVQRGD QASIVGGAIE FVKELEHHLL SLQYEKRLRA SAAVRSRSND
201: DEQCHASTLH DGFFISPQYT GYSQWKRRRG DGKGDEAQQE NATGMDVEAT LVQGHVNLKV AGRRRRGQLV RAIAAMEELR LSVLHLNIIC LEPSSILYSL
301: NLKMEEECKL GSADEVATAV HQIFSYINAC
001: MSGLMSFGEL EDQFGQISDT TMEEKIPFLQ MLQCIEHPFT TTEPNQFLQS LLQIQTLESK SCLTLETNIK RDPGQTDDPE KDPRTENGAV TVKEKRKRKR
101: TRAPKNKDEV ENQRMTHIAV ERNRRRQMNE HLNSLRSLMP PSFLQRGDQA SIVGGAIDFI KELEQLLQSL EAEKRKDGTD ETPKTASCSS SSSLACTNSS
201: ISSVSTTSEN GFTARFGGGD TTEVEATVIQ NHVSLKVRCK RGKRQILKAI VSIEELKLAI LHLTISSSFD FVIYSFNLKM EDGCKLGSAD EIATAVHQIF
301: EQINGEVMWS NLSRT
101: TRAPKNKDEV ENQRMTHIAV ERNRRRQMNE HLNSLRSLMP PSFLQRGDQA SIVGGAIDFI KELEQLLQSL EAEKRKDGTD ETPKTASCSS SSSLACTNSS
201: ISSVSTTSEN GFTARFGGGD TTEVEATVIQ NHVSLKVRCK RGKRQILKAI VSIEELKLAI LHLTISSSFD FVIYSFNLKM EDGCKLGSAD EIATAVHQIF
301: EQINGEVMWS NLSRT
Arabidopsis Description
BHLH57Transcription factor bHLH57 [Source:UniProtKB/Swiss-Prot;Acc:Q9M128]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.