Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P06660_001 | Banana | mitochondrion, nucleus | 78.39 | 83.87 |
| GSMUA_Achr10P... | Banana | mitochondrion | 59.3 | 59.6 |
| GSMUA_Achr11P... | Banana | mitochondrion | 52.26 | 55.03 |
| Os02t0759000-01 | Rice | cytosol | 38.19 | 50.0 |
| GSMUA_Achr2P22310_001 | Banana | nucleus | 58.29 | 47.93 |
| GSMUA_Achr5P17900_001 | Banana | nucleus | 61.81 | 43.62 |
| GSMUA_Achr5P05450_001 | Banana | nucleus | 62.81 | 43.55 |
| GSMUA_Achr10P... | Banana | nucleus | 65.33 | 42.07 |
| GSMUA_Achr6P10290_001 | Banana | nucleus | 60.8 | 41.58 |
| GSMUA_Achr8P28400_001 | Banana | nucleus | 41.21 | 41.21 |
| GSMUA_Achr6P02150_001 | Banana | nucleus | 68.84 | 39.71 |
| Solyc11g010340.1.1 | Tomato | nucleus | 58.29 | 38.93 |
| GSMUA_Achr8P17650_001 | Banana | nucleus | 56.28 | 37.84 |
| VIT_07s0191g00240.t01 | Wine grape | nucleus | 60.8 | 37.58 |
| GSMUA_Achr7P12790_001 | Banana | nucleus | 61.31 | 37.31 |
| Zm00001d020790_P001 | Maize | nucleus | 60.3 | 36.14 |
| Os09t0468700-00 | Rice | nucleus | 63.32 | 35.9 |
| EER96894 | Sorghum | nucleus | 60.8 | 35.8 |
| TraesCS5D01G255100.1 | Wheat | nucleus | 59.8 | 35.42 |
| GSMUA_Achr11P... | Banana | nucleus | 53.27 | 35.33 |
| GSMUA_Achr7P21110_001 | Banana | nucleus | 33.67 | 34.9 |
| TraesCS5B01G245900.1 | Wheat | nucleus | 60.3 | 34.88 |
| TraesCS6A01G315700.1 | Wheat | nucleus | 53.77 | 34.85 |
| Zm00001d005939_P001 | Maize | nucleus | 58.29 | 34.83 |
| TraesCS5A01G248200.1 | Wheat | nucleus | 60.3 | 34.78 |
| GSMUA_Achr7P21190_001 | Banana | nucleus | 33.67 | 33.84 |
| TraesCS6B01G346100.1 | Wheat | nucleus | 53.27 | 33.23 |
| TraesCS6D01G294900.1 | Wheat | nucleus | 52.76 | 32.92 |
| PGSC0003DMT400041644 | Potato | nucleus | 38.69 | 32.49 |
| KXG30709 | Sorghum | nucleus | 56.78 | 32.29 |
| Zm00001d052192_P001 | Maize | nucleus | 55.28 | 31.88 |
| Zm00001d018119_P001 | Maize | nucleus | 56.28 | 31.82 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 44.72 | 30.48 |
| CDY37820 | Canola | nucleus | 32.66 | 29.82 |
| GSMUA_Achr11P... | Banana | nucleus | 41.71 | 29.12 |
| AT5G65320.1 | Thale cress | nucleus | 43.22 | 29.05 |
| Bra031865.1-P | Field mustard | nucleus | 31.66 | 28.9 |
| CDY33966 | Canola | nucleus | 43.22 | 28.48 |
| GSMUA_Achr2P06030_001 | Banana | nucleus | 44.72 | 27.9 |
| GSMUA_Achr11P... | Banana | nucleus | 44.22 | 26.67 |
| HORVU5Hr1G070000.3 | Barley | nucleus, plastid | 59.8 | 25.21 |
| GSMUA_Achr10P... | Banana | nucleus | 32.66 | 24.9 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 45.23 | 24.59 |
| GSMUA_Achr5P06780_001 | Banana | cytosol | 33.67 | 23.67 |
| GSMUA_Achr8P19870_001 | Banana | cytosol, golgi, nucleus | 35.18 | 22.51 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P15000_001 | EnsemblPlants:GSMUA_Achr9T15000_001 | EnsemblPlantsGene:GSMUA_Achr9G15000_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF26 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002966158 | UniProt:M0U0F8 | MapMan:15.5.32 | : |
Description
Transcription factor bHLH96 [Source:GMGC_GENE;Acc:GSMUA_Achr9G15000_001]
Coordinates
chr9:-:9847013..9847942
Molecular Weight (calculated)
22356.7 Da
IEP (calculated)
6.874
GRAVY (calculated)
-0.141
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHIAVERNR RRLMNEYLAV LRSLMPASYV QKGDQASIVG GAINFVKELE QSVQSLEAQK RIRERSKAAP FADFFTFPQY SSSSSHCTST SSTDTTATVE
101: AARRNPSAMA DIEVTIVESH ANVKIFSRWR PRQLLMLVLG LQNLRLTTLH LNVTTVDEMV LYCFSLKVED DCQCASVDVI ATAVHQIIAR IEEEETAHH
101: AARRNPSAMA DIEVTIVESH ANVKIFSRWR PRQLLMLVLG LQNLRLTTLH LNVTTVDEMV LYCFSLKVED DCQCASVDVI ATAVHQIIAR IEEEETAHH
001: MPLEAVVYPQ DPFGYLSNCK DFMFHDLYSQ EEFVAQDTKN NIDKLGHEQS FVEQGKEDDH QWRDYHQYPL LIPSLGEELG LTAIDVESHP PPQHRRKRRR
101: TRNCKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP SSYAQRGDQA SIVGGAINYV KELEHILQSM EPKRTRTHDP KGDKTSTSSL VGPFTDFFSF
201: PQYSTKSSSD VPESSSSPAE IEVTVAESHA NIKIMTKKKP RQLLKLITSL QSLRLTLLHL NVTTLHNSIL YSISVRVEEG SQLNTVDDIA TALNQTIRRI
301: QEET
101: TRNCKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP SSYAQRGDQA SIVGGAINYV KELEHILQSM EPKRTRTHDP KGDKTSTSSL VGPFTDFFSF
201: PQYSTKSSSD VPESSSSPAE IEVTVAESHA NIKIMTKKKP RQLLKLITSL QSLRLTLLHL NVTTLHNSIL YSISVRVEEG SQLNTVDDIA TALNQTIRRI
301: QEET
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT1G22490]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.