Factsheet for TraesCS6B01G346100.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G315700.1	Wheat	nucleus	90.6	94.14
TraesCS6D01G294900.1	Wheat	nucleus	93.1	93.1
Os02t0759000-01	Rice	cytosol	33.23	69.74
KXG30709	Sorghum	nucleus	66.14	60.29
Zm00001d052192_P001	Maize	nucleus	64.58	59.71
Zm00001d018119_P001	Maize	nucleus	64.89	58.81
GSMUA_Achr3P06660_001	Banana	mitochondrion, nucleus	33.23	56.99
GSMUA_Achr9P15000_001	Banana	mitochondrion	33.23	53.27
TraesCS4B01G304500.1	Wheat	nucleus	45.14	46.6
GSMUA_Achr5P05450_001	Banana	nucleus	41.07	45.64
Solyc11g010340.1.1	Tomato	nucleus	42.63	45.64
PGSC0003DMT400041644	Potato	nucleus	32.92	44.3
VIT_07s0191g00240.t01	Wine grape	nucleus	43.89	43.48
TraesCS2B01G469700.1	Wheat	nucleus	43.89	42.81
TraesCS2B01G469800.1	Wheat	nucleus	43.89	42.81
TraesCS6B01G366200.1	Wheat	nucleus	45.14	41.62
TraesCS5B01G245900.1	Wheat	nucleus	44.83	41.57
TraesCS6B01G291200.1	Wheat	nucleus	41.07	38.99
CDY37820	Canola	nucleus	24.45	35.78
Bra031865.1-P	Field mustard	nucleus	24.14	35.32
CDY33966	Canola	nucleus	31.97	33.77
AT5G65320.1	Thale cress	nucleus	29.47	31.76
TraesCS2B01G141600.1	Wheat	plastid	23.51	31.51
TraesCS4B01G347100.1	Wheat	extracellular	29.15	31.0
TraesCS1B01G300100.1	Wheat	nucleus	29.78	22.78
TraesCS7B01G232000.1	Wheat	cytosol	22.57	19.78

Protein Annotations

EnsemblPlants:TraesCS6B01G346100.1	EnsemblPlantsGene:TraesCS6B01G346100	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	ncoils:Coil
PANTHER:PTHR11969	PANTHER:PTHR11969:SF24	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	TIGR:cd00083	MapMan:15.5.32	:	:	:

Description

No Description!

Coordinates

chr6B:+:609886559..609888104

Molecular Weight (calculated)

34392.8 Da

IEP (calculated)

8.229

GRAVY (calculated)

-0.304

Length

319 amino acids

Sequence
(BLAST)

001: MALEAVVFPH EHLACSTDKV AAAMSMYAPS LGRGISIDEF EEKGGVVLQD QEEVLGATYW AAAVEGNWDE KHCWAGPESS PPPAVAPTAP AASGRGKASS
101: SAAARRRRRR PKAVKNREET ESQRRNHIAV ERNRRRQMND YLAVLRSAMP PSYAQRGDQA SIVAGAINFV KELEQLLQSL EAQKRRRAQL TSTPPFAGFF
201: TFPQYSAGAG AGTADGSGDA ESRRGARPGV ADVEVAVAES HASVKVLAPR RPRQLVRMVV AMQCLGLTVL HLNATATADQ LVFYSFSLRM EDECRLSTVD
301: EIAAAVHQMV AEVHAGGPC

Best Arabidopsis Sequence Match ( AT4G01460.2 )
(BLAST)

001: MSGLMSFGEL EDQFGQISDT TMEEKIPFLQ MLQCIEHPFT TTEPNQFLQS LLQIQTLESK SCLTLETNIK RDPGQTDDPE KDPRTENGAV TVKEKRKRKR
101: TRAPKNKDEV ENQRMTHIAV ERNRRRQMNE HLNSLRSLMP PSFLQRGDQA SIVGGAIDFI KELEQLLQSL EAEKRKDGTD ETPKTASCSS SSSLACTNSS
201: ISSVSTTSEN GFTARFGGGD TTEVEATVIQ NHVSLKVRCK RGKRQILKAI VSIEELKLAI LHLTISSSFD FVIYSFNLKM EDGCKLGSAD EIATAVHQIF
301: EQINGEVMWS NLSRT

Arabidopsis Description

BHLH57Transcription factor bHLH57 [Source:UniProtKB/Swiss-Prot;Acc:Q9M128]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.