Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG30709 | Sorghum | nucleus | 86.08 | 86.57 |
| Zm00001d052192_P001 | Maize | nucleus | 77.27 | 78.84 |
| Os02t0759000-01 | Rice | cytosol | 32.39 | 75.0 |
| TraesCS6A01G315700.1 | Wheat | nucleus | 58.81 | 67.43 |
| TraesCS6D01G294900.1 | Wheat | nucleus | 58.81 | 64.89 |
| TraesCS6B01G346100.1 | Wheat | nucleus | 58.81 | 64.89 |
| GSMUA_Achr3P06660_001 | Banana | mitochondrion, nucleus | 31.25 | 59.14 |
| GSMUA_Achr9P15000_001 | Banana | mitochondrion | 31.82 | 56.28 |
| Zm00001d031260_P001 | Maize | nucleus | 32.39 | 52.78 |
| GSMUA_Achr5P05450_001 | Banana | nucleus | 38.35 | 47.04 |
| Solyc11g010340.1.1 | Tomato | nucleus | 38.92 | 45.97 |
| Zm00001d020790_P001 | Maize | nucleus | 42.05 | 44.58 |
| Zm00001d005939_P001 | Maize | nucleus | 41.19 | 43.54 |
| VIT_07s0191g00240.t01 | Wine grape | nucleus | 39.49 | 43.17 |
| PGSC0003DMT400041644 | Potato | nucleus | 28.41 | 42.19 |
| Zm00001d048229_P001 | Maize | nucleus | 42.33 | 41.74 |
| Zm00001d027987_P001 | Maize | nucleus | 38.92 | 41.39 |
| Zm00001d026046_P001 | Maize | nucleus | 37.78 | 39.58 |
| CDY37820 | Canola | nucleus | 23.58 | 38.07 |
| Bra031865.1-P | Field mustard | nucleus | 23.01 | 37.16 |
| Zm00001d002492_P001 | Maize | mitochondrion | 18.47 | 36.93 |
| Zm00001d051509_P001 | Maize | nucleus | 34.38 | 36.45 |
| Zm00001d009778_P001 | Maize | nucleus | 22.44 | 36.07 |
| CDY33966 | Canola | nucleus | 30.11 | 35.1 |
| AT5G65320.1 | Thale cress | nucleus | 29.26 | 34.8 |
| Zm00001d017677_P001 | Maize | nucleus | 34.94 | 33.61 |
| Zm00001d027419_P001 | Maize | nucleus | 25.57 | 28.94 |
| Zm00001d048478_P001 | Maize | nucleus | 25.0 | 27.16 |
| Zm00001d009715_P001 | Maize | nucleus | 27.84 | 23.45 |
| Zm00001d016095_P001 | Maize | nucleus | 22.44 | 20.1 |
| Zm00001d053391_P001 | Maize | cytosol, nucleus, plastid | 21.31 | 20.0 |
| Zm00001d046096_P001 | Maize | nucleus | 19.32 | 19.65 |
Protein Annotations
| EntrezGene:100217195 | MapMan:15.5.32 | Gene3D:4.10.280.10 | ProteinID:AQK75074.1 | UniProt:B4FLW8 | EMBL:BT038106 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | EMBL:KJ726873 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11969 |
| PANTHER:PTHR11969:SF24 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00017B6B79 | EnsemblPlantsGene:Zm00001d018119 | EnsemblPlants:Zm00001d018119_P001 |
| EnsemblPlants:Zm00001d018119_T001 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
bHLH-transcription factor 161Transcription factor bHLH99
Coordinates
chr5:-:214694032..214695978
Molecular Weight (calculated)
37115.8 Da
IEP (calculated)
6.505
GRAVY (calculated)
-0.256
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEAVVFPK EHPGCTAVKA RPASLGCGFH TEELEVEDKG GVVLQGEAAD ALPPPGGAAT TWDWDAVLCP CSTAPAAGAV EECWDVQQQQ HQLLSVSPPP
101: SSAVAASSSG RRKAAASEAA RRRRRRPKAV RNTDEMESQR RNHIAVERNR RRQMNEYLSV LRSAMPPSYT QRGDQASIVA GAINFVKELE QLLQSLEAQK
201: RCTEPPAPAP FAGFFIFPQY STTAATGGAV GSSSDSAGSG GDQSGGGGGC AGARRGVADI EVSLAESHAN VKVLAARRPR QLLRMVVALQ CLGLTVLHLN
301: VTTTADHLAL YSLSLKMEDE CRLSPSVDDI AAAVNEILAD ISDECARGGP GH
101: SSAVAASSSG RRKAAASEAA RRRRRRPKAV RNTDEMESQR RNHIAVERNR RRQMNEYLSV LRSAMPPSYT QRGDQASIVA GAINFVKELE QLLQSLEAQK
201: RCTEPPAPAP FAGFFIFPQY STTAATGGAV GSSSDSAGSG GDQSGGGGGC AGARRGVADI EVSLAESHAN VKVLAARRPR QLLRMVVALQ CLGLTVLHLN
301: VTTTADHLAL YSLSLKMEDE CRLSPSVDDI AAAVNEILAD ISDECARGGP GH
001: MALEAVVYPQ DPFSYISCKD FPFYDLYFQE EEDQDPQDTK NNIKLGQGQG HGFASNNYNG RTGDYSDDYN YNEEDLQWPR DLPYGSAVDT ESQPPPSDVA
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS
Arabidopsis Description
BHLH96Transcription factor bHLH96 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.