Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37820 | Canola | nucleus | 98.62 | 98.62 |
| AT5G65320.1 | Thale cress | nucleus | 68.35 | 50.34 |
| Bra040856.1-P | Field mustard | nucleus | 33.95 | 34.1 |
| PGSC0003DMT400041644 | Potato | nucleus | 35.78 | 32.91 |
| GSMUA_Achr3P06660_001 | Banana | mitochondrion, nucleus | 27.98 | 32.8 |
| GSMUA_Achr2P22310_001 | Banana | nucleus | 35.78 | 32.23 |
| GSMUA_Achr9P15000_001 | Banana | mitochondrion | 28.9 | 31.66 |
| Solyc11g010340.1.1 | Tomato | nucleus | 41.28 | 30.2 |
| VIT_07s0191g00240.t01 | Wine grape | nucleus | 44.04 | 29.81 |
| GSMUA_Achr10P... | Banana | mitochondrion | 27.06 | 29.8 |
| GSMUA_Achr5P17900_001 | Banana | nucleus | 36.7 | 28.37 |
| Zm00001d031260_P001 | Maize | nucleus | 27.98 | 28.24 |
| GSMUA_Achr6P10290_001 | Banana | nucleus | 36.7 | 27.49 |
| Bra016377.1-P | Field mustard | nucleus | 38.07 | 27.48 |
| Bra016080.1-P | Field mustard | nucleus | 39.45 | 26.46 |
| GSMUA_Achr5P05450_001 | Banana | nucleus | 34.4 | 26.13 |
| Bra012329.1-P | Field mustard | nucleus | 36.24 | 26.07 |
| TraesCS4B01G304500.1 | Wheat | nucleus | 36.7 | 25.89 |
| TraesCS4D01G302700.1 | Wheat | nucleus | 36.7 | 25.81 |
| TraesCS4A01G404700.1 | Wheat | nucleus | 36.7 | 25.81 |
| Os02t0759000-01 | Rice | cytosol | 17.89 | 25.66 |
| GSMUA_Achr10P... | Banana | nucleus | 35.78 | 25.24 |
| TraesCS6A01G315700.1 | Wheat | nucleus | 35.32 | 25.08 |
| GSMUA_Achr8P17650_001 | Banana | nucleus | 33.95 | 25.0 |
| Bra003886.1-P | Field mustard | nucleus | 37.16 | 25.0 |
| Os03t0188400-01 | Rice | nucleus | 37.61 | 24.92 |
| Zm00001d020790_P001 | Maize | nucleus | 37.61 | 24.7 |
| EER96894 | Sorghum | nucleus | 38.07 | 24.56 |
| Bra008017.1-P | Field mustard | nucleus | 36.24 | 24.23 |
| GSMUA_Achr7P12790_001 | Banana | nucleus | 36.24 | 24.16 |
| TraesCS6D01G294900.1 | Wheat | nucleus | 35.32 | 24.14 |
| TraesCS6B01G346100.1 | Wheat | nucleus | 35.32 | 24.14 |
| GSMUA_Achr6P02150_001 | Banana | nucleus | 38.07 | 24.06 |
| Zm00001d027987_P001 | Maize | nucleus | 36.24 | 23.87 |
| OQU91887 | Sorghum | nucleus | 35.32 | 23.77 |
| Zm00001d005939_P001 | Maize | nucleus | 36.24 | 23.72 |
| Bra004505.1-P | Field mustard | nucleus | 29.36 | 23.62 |
| Os09t0468700-00 | Rice | nucleus | 37.61 | 23.36 |
| Bra025007.1-P | Field mustard | nucleus | 29.36 | 23.36 |
| Os10t0376900-01 | Rice | nucleus | 34.86 | 23.17 |
| Os08t0483900-01 | Rice | nucleus | 38.53 | 23.14 |
| Zm00001d018119_P001 | Maize | nucleus | 37.16 | 23.01 |
| TraesCS5B01G245900.1 | Wheat | nucleus | 36.24 | 22.97 |
| Bra007644.1-P | Field mustard | nucleus | 29.36 | 22.94 |
| TraesCS5D01G255100.1 | Wheat | nucleus | 35.32 | 22.92 |
| TraesCS5A01G248200.1 | Wheat | nucleus | 36.24 | 22.9 |
| Bra020775.1-P | Field mustard | nucleus | 21.1 | 22.89 |
| KXG30709 | Sorghum | nucleus | 36.7 | 22.86 |
| TraesCS6B01G366200.1 | Wheat | nucleus | 36.24 | 22.83 |
| TraesCS6D01G315200.1 | Wheat | nucleus | 35.78 | 22.81 |
| TraesCS6A01G335500.1 | Wheat | nucleus | 36.7 | 22.79 |
| EER95359 | Sorghum | nucleus | 37.16 | 22.69 |
| Zm00001d048229_P001 | Maize | nucleus | 36.7 | 22.41 |
| Bra040234.1-P | Field mustard | nucleus | 20.64 | 22.39 |
| Bra037414.1-P | Field mustard | nucleus | 31.65 | 22.19 |
| Bra017533.1-P | Field mustard | nucleus | 28.9 | 21.8 |
| Bra001183.1-P | Field mustard | nucleus | 20.18 | 21.26 |
| Zm00001d052192_P001 | Maize | nucleus | 33.49 | 21.16 |
| HORVU6Hr1G081120.4 | Barley | nucleus | 33.49 | 21.1 |
| Bra040483.1-P | Field mustard | nucleus | 28.9 | 19.81 |
| Bra027958.1-P | Field mustard | nucleus | 26.15 | 19.52 |
| HORVU4Hr1G078270.2 | Barley | plastid | 36.7 | 18.1 |
| HORVU5Hr1G070000.3 | Barley | nucleus, plastid | 34.86 | 16.1 |
| Bra028357.1-P | Field mustard | nucleus | 28.9 | 15.75 |
| Bra001929.1-P | Field mustard | nucleus | 28.9 | 15.56 |
| Bra029088.1-P | Field mustard | nucleus | 23.39 | 15.18 |
| Bra022638.1-P | Field mustard | nucleus | 24.31 | 15.14 |
| Bra003073.1-P | Field mustard | nucleus | 26.15 | 13.16 |
| Bra028351.1-P | Field mustard | nucleus | 21.56 | 13.06 |
Protein Annotations
| EnsemblPlants:Bra031865.1 | EnsemblPlants:Bra031865.1-P | EnsemblPlantsGene:Bra031865 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF49 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg |
| SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002546ABD | UniProt:M4EST5 | MapMan:15.5.32 | : |
Description
AT5G65320 (E=2e-051) | basic helix-loop-helix (bHLH) family protein
Coordinates
chrA02:-:27402377..27403944
Molecular Weight (calculated)
25337.1 Da
IEP (calculated)
9.555
GRAVY (calculated)
-0.744
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MMFQQEYPYD FSLMKTSSIY EVLDYSIAEQ HSHPTENLSS LQAQGGFSQE PPRKKRKRRR TRSEQKIEEK ENQRMNHIAV ERNRRRQMNH FLSILKAMMP
101: LFYSRRSDQA SIIEGTINYL KKQEQLLQSF EAQLKPTKPN QSINILSNFF NFPQYSTATA CASSRHHHNG LAVVANVEVT MVEMHANIKV DEDCRLTTTA
201: NEIADAVHEV VSRIHKGH
101: LFYSRRSDQA SIIEGTINYL KKQEQLLQSF EAQLKPTKPN QSINILSNFF NFPQYSTATA CASSRHHHNG LAVVANVEVT MVEMHANIKV DEDCRLTTTA
201: NEIADAVHEV VSRIHKGH
001: MMFQQDYPHG FSLVETSLSY EMLDYFQNIV VSNSEDVASQ QNSISSSSYS SATLSCSITE QKSHLTEKLS PLRERYGCGD FLSRKRRRRS EKTIVDKENQ
101: RMNHIAVERN RRKQMNHFLS ILKSMMPLSY SQPNDQASII EGTISYLKKL EQRLQSLEAQ LKATKLNQSP NIFSDFFMFP QYSTATATAT ATASSSSSSH
201: HHHKRLEVVA DVEVTMVERH ANIKVLTKTQ PRLLFKIINE FNSLGLSTLH LNLTTSKDMS LFTFSVKVEA DCQLTPSGNE VANTVHEVVR RVHKER
101: RMNHIAVERN RRKQMNHFLS ILKSMMPLSY SQPNDQASII EGTISYLKKL EQRLQSLEAQ LKATKLNQSP NIFSDFFMFP QYSTATATAT ATASSSSSSH
201: HHHKRLEVVA DVEVTMVERH ANIKVLTKTQ PRLLFKIINE FNSLGLSTLH LNLTTSKDMS LFTFSVKVEA DCQLTPSGNE VANTVHEVVR RVHKER
Arabidopsis Description
BHLH99Transcription factor bHLH99 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.