Factsheet for Os09t0468700-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G255100.1	Wheat	nucleus	70.37	73.51
TraesCS5A01G248200.1	Wheat	nucleus	71.79	73.04
TraesCS5B01G245900.1	Wheat	nucleus	70.94	72.38
Zm00001d020790_P001	Maize	nucleus	66.38	70.18
EER96894	Sorghum	nucleus	66.95	69.53
GSMUA_Achr3P06660_001	Banana	mitochondrion, nucleus	36.75	69.35
Zm00001d005939_P001	Maize	nucleus	63.25	66.67
GSMUA_Achr9P15000_001	Banana	mitochondrion	35.9	63.32
Os08t0483900-01	Rice	nucleus	58.69	56.75
Os02t0759000-01	Rice	cytosol	24.5	56.58
HORVU5Hr1G070000.3	Barley	nucleus, plastid	69.23	51.48
VIT_07s0191g00240.t01	Wine grape	nucleus	46.15	50.31
GSMUA_Achr5P05450_001	Banana	nucleus	39.89	48.78
Solyc11g010340.1.1	Tomato	nucleus	41.03	48.32
Os03t0188400-01	Rice	nucleus	44.73	47.72
Os10t0376900-01	Rice	nucleus	44.44	47.56
PGSC0003DMT400041644	Potato	nucleus	29.06	43.04
CDY37820	Canola	nucleus	23.93	38.53
Bra031865.1-P	Field mustard	nucleus	23.36	37.61
Os05t0597000-00	Rice	nucleus	23.65	36.56
Os02t0691500-01	Rice	nucleus	37.61	35.39
AT5G65320.1	Thale cress	nucleus	29.34	34.8
CDY33966	Canola	nucleus	29.91	34.77
Os03t0122100-00	Rice	mitochondrion, nucleus, plastid	28.77	32.48
Os05t0586300-00	Rice	nucleus	30.48	27.65
Os06t0526100-01	Rice	cytosol, endoplasmic reticulum, nucleus	23.08	20.51
Os02t0257500-00	Rice	nucleus	22.51	19.04

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:9267272	ProteinID:BAD19748.1	ProteinID:BAD22258.1	ProteinID:BAH94607.1
ProteinID:BAT08537.1	ncoils:Coil	ProteinID:EAZ45057.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	EnsemblPlantsGene:Os09g0468700	EnsemblPlants:Os09t0468700-00
PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR11969	PANTHER:PTHR11969:SF28	UniProt:Q6K4B1	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0000375951	RefSeq:XP_015612232.1	RefSeq:XP_015612233.1	InterPro:bHLH_dom	SEG:seg

Description

basic helix-loop-helix protein 046Helix-loop-helix DNA-binding domain containing protein. (Os09t0468700-00)

Coordinates

chr9:+:17826692..17828508

Molecular Weight (calculated)

37196.1 Da

IEP (calculated)

6.511

GRAVY (calculated)

-0.186

Length

351 amino acids

Sequence
(BLAST)

001: MALEAVLLSR GDLFGRRRCA MEGGGGGWSS PFSGFEGVMD LDGGNWDAAA CSSMLLHGFQ ELEIPAAAAA AAAMAPPPPP VEPANCAENA GGVGGHQEDQ
101: AAVAAAATAV QSGRRKRRRA RAAKNKEEVE SQRMTHIAVE RNRRKQMNEY LAVLRSLMPP SYAQRGDQAS IVGGAINFVK ELEQLLQSLE ARKSSRQCAA
201: HDAAAAAAPF ASFFTFPQYS MSAAAAAAPV APVVNELHGR DDGGAGTAEA EASGSKPSAV ADVEVTMVES HANLRVLSRR RPRQLLRLVV ALQGHRLTVL
301: HLNMTSAGHM VLYSFSLKVE DDCQLTSVDE IATAAHQIIE KIQEEQGCSL D

Best Arabidopsis Sequence Match ( AT1G22490.1 )
(BLAST)

001: MPLEAVVYPQ DPFGYLSNCK DFMFHDLYSQ EEFVAQDTKN NIDKLGHEQS FVEQGKEDDH QWRDYHQYPL LIPSLGEELG LTAIDVESHP PPQHRRKRRR
101: TRNCKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP SSYAQRGDQA SIVGGAINYV KELEHILQSM EPKRTRTHDP KGDKTSTSSL VGPFTDFFSF
201: PQYSTKSSSD VPESSSSPAE IEVTVAESHA NIKIMTKKKP RQLLKLITSL QSLRLTLLHL NVTTLHNSIL YSISVRVEEG SQLNTVDDIA TALNQTIRRI
301: QEET

Arabidopsis Description

basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT1G22490]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.