Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G079250.1 | Barley | cytosol | 61.52 | 66.58 |
| TraesCS7A01G350900.1 | Wheat | nucleus | 60.76 | 65.93 |
| TraesCS7B01G232000.1 | Wheat | cytosol | 60.25 | 65.38 |
| TraesCS7D01G327900.1 | Wheat | nucleus | 59.75 | 64.84 |
| Zm00001d046096_P001 | Maize | nucleus | 56.2 | 64.16 |
| EER88428 | Sorghum | nucleus | 58.23 | 60.53 |
| GSMUA_Achr10P... | Banana | nucleus | 34.18 | 51.72 |
| Os02t0257500-00 | Rice | nucleus | 50.89 | 48.43 |
| GSMUA_Achr8P19870_001 | Banana | cytosol, golgi, nucleus | 37.72 | 47.91 |
| KRH53438 | Soybean | nucleus | 42.03 | 47.56 |
| KRH64504 | Soybean | nucleus | 41.27 | 47.38 |
| VIT_16s0050g02500.t01 | Wine grape | nucleus | 40.0 | 46.75 |
| GSMUA_Achr5P06780_001 | Banana | cytosol | 33.16 | 46.29 |
| KRH18131 | Soybean | nucleus | 39.24 | 46.13 |
| Solyc03g007410.2.1 | Tomato | nucleus | 38.73 | 45.81 |
| KRH16521 | Soybean | nucleus | 37.72 | 45.02 |
| Bra029088.1-P | Field mustard | nucleus | 37.97 | 44.64 |
| Bra022638.1-P | Field mustard | nucleus | 38.99 | 44.0 |
| CDY47059 | Canola | nucleus | 38.73 | 43.84 |
| CDY14397 | Canola | nucleus | 39.24 | 43.66 |
| PGSC0003DMT400023497 | Potato | nucleus | 39.24 | 43.66 |
| CDX96201 | Canola | nucleus | 38.73 | 43.47 |
| CDY38734 | Canola | nucleus | 38.73 | 43.34 |
| CDY19692 | Canola | nucleus | 38.48 | 43.06 |
| AT5G53210.1 | Thale cress | nucleus | 39.49 | 42.86 |
| Os05t0597000-00 | Rice | nucleus | 23.29 | 40.53 |
| Bra003073.1-P | Field mustard | nucleus | 38.73 | 35.33 |
| Os05t0586300-00 | Rice | nucleus | 23.8 | 24.29 |
| Os02t0759000-01 | Rice | cytosol | 9.11 | 23.68 |
| Os10t0376900-01 | Rice | nucleus | 19.49 | 23.48 |
| Os03t0188400-01 | Rice | nucleus | 19.49 | 23.4 |
| Os09t0468700-00 | Rice | nucleus | 20.51 | 23.08 |
| Os02t0691500-01 | Rice | nucleus | 20.76 | 21.98 |
| Os08t0483900-01 | Rice | nucleus | 20.0 | 21.76 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 15.95 | 20.26 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:9268477 | UniProt:A0A0P0WXG4 | ProteinID:BAS98035.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlantsGene:Os06g0526100 | EnsemblPlants:Os06t0526100-01 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF97 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0001C7C8CE | RefSeq:XP_015642808.1 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
basic helix-loop-helix protein 054Hypothetical conserved gene. (Os06t0526100-01)
Coordinates
chr6:+:19490529..19494500
Molecular Weight (calculated)
41513.6 Da
IEP (calculated)
6.977
GRAVY (calculated)
-0.178
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDALCDQLL LVDSDGGEFI PHHADADADD LFTILETWEG CANVVAGGAP ATTTTLGSPI AAAACISGVV GGQNHQQLPE PAAAKTVPAT NNKRREEEVA
101: DRDGDGDDDD GSPQKRRKCC SPESSTTDVA AATTPKTAHI AVERNRRKQM NENLAVLRSL MPCFYVKRGD QASIIGGVVD YIKELQQVLH SLEAKKQRKV
201: YTDQVLSPRP PATVAASCCS PRPPQLSPRL PPQLLKSTPP LSPRLAVPIS PRTPPTPGSP YRLLRLPPPP PPASGSNYAS PAMTPTHHET AAPSLDAIAA
301: ELSAYASRQA LGGGLLLPDV KVEFAGANLV LKTVSQRSPG QAVKIIAALE GRSLEILHAK ISTVDDTAVN SFTVKVCTAS LLLHGTAISA LALIM
101: DRDGDGDDDD GSPQKRRKCC SPESSTTDVA AATTPKTAHI AVERNRRKQM NENLAVLRSL MPCFYVKRGD QASIIGGVVD YIKELQQVLH SLEAKKQRKV
201: YTDQVLSPRP PATVAASCCS PRPPQLSPRL PPQLLKSTPP LSPRLAVPIS PRTPPTPGSP YRLLRLPPPP PPASGSNYAS PAMTPTHHET AAPSLDAIAA
301: ELSAYASRQA LGGGLLLPDV KVEFAGANLV LKTVSQRSPG QAVKIIAALE GRSLEILHAK ISTVDDTAVN SFTVKVCTAS LLLHGTAISA LALIM
001: MQEIIPDFLE ECEFVDTSLA GDDLFAILES LEGAGEISPT AASTPKDGTT SSKELVKDQD YENSSPKRKK QRLETRKEED EEEEDGDGEA EEDNKQDGQQ
101: KMSHVTVERN RRKQMNEHLT VLRSLMPCFY VKRGDQASII GGVVEYISEL QQVLQSLEAK KQRKTYAEVL SPRVVPSPRP SPPVLSPRKP PLSPRINHHQ
201: IHHHLLLPPI SPRTPQPTSP YRAIPPQLPL IPQPPLRSYS SLASCSSLGD PPPYSPASSS SSPSVSSNHE SSVINELVAN SKSALADVEV KFSGANVLLK
301: TVSHKIPGQV MKIIAALEDL ALEILQVNIN TVDETMLNSF TIKVRTNNHP N
101: KMSHVTVERN RRKQMNEHLT VLRSLMPCFY VKRGDQASII GGVVEYISEL QQVLQSLEAK KQRKTYAEVL SPRVVPSPRP SPPVLSPRKP PLSPRINHHQ
201: IHHHLLLPPI SPRTPQPTSP YRAIPPQLPL IPQPPLRSYS SLASCSSLGD PPPYSPASSS SSPSVSSNHE SSVINELVAN SKSALADVEV KFSGANVLLK
301: TVSHKIPGQV MKIIAALEDL ALEILQVNIN TVDETMLNSF TIKVRTNNHP N
Arabidopsis Description
SPCHSPCH [Source:UniProtKB/TrEMBL;Acc:A0A178UF96]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.