Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95359 | Sorghum | nucleus | 82.18 | 76.19 |
| Zm00001d048229_P001 | Maize | nucleus | 80.66 | 74.79 |
| Os03t0188400-01 | Rice | nucleus | 66.47 | 66.87 |
| TraesCS4B01G304500.1 | Wheat | nucleus | 60.42 | 64.72 |
| TraesCS4D01G302700.1 | Wheat | nucleus | 60.42 | 64.52 |
| TraesCS4A01G404700.1 | Wheat | nucleus | 59.52 | 63.55 |
| GSMUA_Achr10P... | Banana | mitochondrion | 34.14 | 57.07 |
| GSMUA_Achr6P10290_001 | Banana | nucleus | 49.85 | 56.7 |
| Zm00001d031260_P001 | Maize | nucleus | 35.65 | 54.63 |
| GSMUA_Achr2P22310_001 | Banana | nucleus | 39.27 | 53.72 |
| VIT_07s0191g00240.t01 | Wine grape | nucleus | 45.62 | 46.89 |
| HORVU4Hr1G078270.2 | Barley | plastid | 60.12 | 45.02 |
| Solyc11g010340.1.1 | Tomato | nucleus | 40.48 | 44.97 |
| Zm00001d020790_P001 | Maize | nucleus | 44.11 | 43.98 |
| Zm00001d005939_P001 | Maize | nucleus | 43.2 | 42.94 |
| PGSC0003DMT400041644 | Potato | nucleus | 29.31 | 40.93 |
| Zm00001d052192_P001 | Maize | nucleus | 41.69 | 40.0 |
| Zm00001d018119_P001 | Maize | nucleus | 41.39 | 38.92 |
| Zm00001d002492_P001 | Maize | mitochondrion | 20.24 | 38.07 |
| Zm00001d026046_P001 | Maize | nucleus | 38.37 | 37.8 |
| CDY37820 | Canola | nucleus | 24.17 | 36.7 |
| Bra031865.1-P | Field mustard | nucleus | 23.87 | 36.24 |
| Zm00001d051509_P001 | Maize | nucleus | 34.74 | 34.64 |
| Zm00001d009778_P001 | Maize | nucleus | 22.36 | 33.79 |
| CDY33966 | Canola | nucleus | 30.51 | 33.44 |
| Zm00001d017677_P001 | Maize | nucleus | 36.56 | 33.06 |
| Zm00001d027419_P001 | Maize | nucleus | 30.82 | 32.8 |
| AT5G65320.1 | Thale cress | nucleus | 29.31 | 32.77 |
| Zm00001d048478_P001 | Maize | nucleus | 29.91 | 30.56 |
| Zm00001d009715_P001 | Maize | nucleus | 30.21 | 23.92 |
| Zm00001d053391_P001 | Maize | cytosol, nucleus, plastid | 23.87 | 21.07 |
| Zm00001d016095_P001 | Maize | nucleus | 24.47 | 20.61 |
| Zm00001d046096_P001 | Maize | nucleus | 21.15 | 20.23 |
Protein Annotations
| EntrezGene:103631833 | MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1D6JR54 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| ProteinID:ONL94435.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF24 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0002214846 | EnsemblPlantsGene:Zm00001d027987 | EnsemblPlants:Zm00001d027987_P001 | EnsemblPlants:Zm00001d027987_T001 | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
bHLH-transcription factor 160Transcription factor bHLH99
Coordinates
chr1:+:19433159..19435672
Molecular Weight (calculated)
35822.0 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.467
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEAVVFSQ PQAGHFGCGR GDSPYAVPWS DLLQGGGGGG FGDVCAAGEW VDQHDLDTCW AAPTVGDDWD WGEALSRDHS SSDAASTDHG SRKAAPEPAA
101: GRRKRRRTRV VKNKEEIESQ RITHIAVERN RRRQMNEYLA VLRSLMPPSH AHRGDQASIV GGAINYVREL EQLLQSLEVQ KSLKQSRGRR PAGGGASCSP
201: PFAGFFSFPQ YSTAPSTTSS SGGEKCCGHD AAAADIEVTM VEGHASLKVL ARRRPKQLLK LVAGLHQLRV PPLHLNVTAA VDAMVLYTFS LKVEDDSKMG
301: SVEDIATAVH EILGSIQRQQ QEEEEEETAA M
101: GRRKRRRTRV VKNKEEIESQ RITHIAVERN RRRQMNEYLA VLRSLMPPSH AHRGDQASIV GGAINYVREL EQLLQSLEVQ KSLKQSRGRR PAGGGASCSP
201: PFAGFFSFPQ YSTAPSTTSS SGGEKCCGHD AAAADIEVTM VEGHASLKVL ARRRPKQLLK LVAGLHQLRV PPLHLNVTAA VDAMVLYTFS LKVEDDSKMG
301: SVEDIATAVH EILGSIQRQQ QEEEEEETAA M
001: MALEAVVYPQ DPFSYISCKD FPFYDLYFQE EEDQDPQDTK NNIKLGQGQG HGFASNNYNG RTGDYSDDYN YNEEDLQWPR DLPYGSAVDT ESQPPPSDVA
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS
Arabidopsis Description
BHLH96Transcription factor bHLH96 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.