Factsheet for Zm00001d009778_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22733	Sorghum	nucleus	83.56	76.89
GSMUA_Achr7P21110_001	Banana	nucleus	63.47	72.4
GSMUA_Achr7P21190_001	Banana	nucleus	63.47	70.2
VIT_05s0020g02700.t01	Wine grape	nucleus	60.73	70.0
TraesCS2A01G120700.1	Wheat	nucleus	66.67	67.59
TraesCS2D01G122800.1	Wheat	nucleus	66.21	67.44
Solyc01g080050.2.1	Tomato	nucleus	58.45	65.64
KRH20902	Soybean	cytosol	56.16	64.4
KRH11385	Soybean	cytosol	55.71	63.87
TraesCS2B01G141600.1	Wheat	plastid	66.67	61.34
HORVU2Hr1G020990.1	Barley	nucleus	65.75	60.5
Os05t0597000-00	Rice	nucleus	62.1	59.91
AT3G06120.1	Thale cress	nucleus	53.42	57.92
Bra040234.1-P	Field mustard	nucleus	52.51	57.21
CDY18843	Canola	nucleus	52.51	57.21
Bra001183.1-P	Field mustard	nucleus	53.88	57.0
CDY08066	Canola	nucleus	53.88	57.0
CDY58338	Canola	nucleus	53.88	57.0
CDY05233	Canola	nucleus	52.51	56.37
CDY24717	Canola	nucleus	51.6	56.22
Bra020775.1-P	Field mustard	nucleus	51.6	56.22
Zm00001d031260_P001	Maize	nucleus	30.59	31.02
Zm00001d053391_P001	Maize	cytosol, nucleus, plastid	45.21	26.4
Zm00001d002492_P001	Maize	mitochondrion	21.0	26.14
Zm00001d005939_P001	Maize	nucleus	38.36	25.23
Zm00001d020790_P001	Maize	nucleus	37.9	25.0
Zm00001d016095_P001	Maize	nucleus	44.75	24.94
Zm00001d046096_P001	Maize	nucleus	37.9	23.99
Zm00001d026046_P001	Maize	nucleus	36.53	23.81
Zm00001d051509_P001	Maize	nucleus	34.7	22.89
Zm00001d027419_P001	Maize	nucleus	32.42	22.83
Zm00001d052192_P001	Maize	nucleus	35.62	22.61
Zm00001d018119_P001	Maize	nucleus	36.07	22.44
Zm00001d027987_P001	Maize	nucleus	33.79	22.36
Zm00001d048478_P001	Maize	nucleus	32.88	22.22
Zm00001d048229_P001	Maize	nucleus	36.07	22.13
Zm00001d009715_P001	Maize	nucleus	40.18	21.05
Zm00001d017677_P001	Maize	nucleus	34.7	20.77

Protein Annotations

EntrezGene:103635442	MapMan:15.5.32	Gene3D:4.10.280.10	ProteinID:AIB04460.1	ProteinID:AQK92687.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0007275	GO:GO:0008150	GO:GO:0009791	GO:GO:0009913
GO:GO:0009987	GO:GO:0010374	GO:GO:0030154	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	UniProt:K7V1X7	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR45509	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000220C7FD	EnsemblPlantsGene:Zm00001d009778	EnsemblPlants:Zm00001d009778_P001	EnsemblPlants:Zm00001d009778_T001	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

bHLH-transcription factor 82Putative HLH DNA-binding domain superfamily protein

Coordinates

chr8:+:80617513..80618172

Molecular Weight (calculated)

23987.0 Da

IEP (calculated)

8.510

GRAVY (calculated)

-0.167

Length

219 amino acids

Sequence
(BLAST)

001: MSHIAVERNR RRQMNEHLKV LRSLTPGLYI KRGDQASIIG GAIEFIKELQ QVLESLEARK KRRSSGGGHS FLTGSPSPTP SPRSHLLSSV STPSPPVMIK
101: ELAACCNSAV ADVEAKISGS NVLLRTLSRR SSIPGRQAVR LIAVLEGLHL EVLHLNISTM EDTVLHSLVL KIGLECQLSV EDLAYEVQQI FGQDTAEQKP
201: QEENHNQHII YSSAMAAAI

Best Arabidopsis Sequence Match ( AT3G06120.1 )
(BLAST)

001: MSHIAVERNR RRQMNEHLKS LRSLTPCFYI KRGDQASIIG GVIEFIKELQ QLVQVLESKK RRKTLNRPSF PYDHQTIEPS SLGAATTRVP FSRIENVMTT
101: STFKEVGACC NSPHANVEAK ISGSNVVLRV VSRRIVGQLV KIISVLEKLS FQVLHLNISS MEETVLYFFV VKIGLECHLS LEELTLEVQK SFVSDEVIVS
201: TN

Arabidopsis Description

MUTETranscription factor MUTE [Source:UniProtKB/Swiss-Prot;Acc:Q9M8K6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.