Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026046_P001 | Maize | nucleus | 71.02 | 37.2 |
| KXG27015 | Sorghum | cytosol | 69.89 | 35.86 |
| GSMUA_Achr11P... | Banana | mitochondrion | 32.95 | 30.69 |
| Zm00001d031260_P001 | Maize | nucleus | 34.66 | 28.24 |
| TraesCS2D01G448000.1 | Wheat | nucleus | 49.43 | 26.28 |
| TraesCS2B01G469700.1 | Wheat | nucleus | 48.3 | 25.99 |
| TraesCS2B01G469800.1 | Wheat | nucleus | 48.3 | 25.99 |
| TraesCS2A01G448800.1 | Wheat | nucleus | 48.86 | 25.98 |
| Zm00001d051509_P001 | Maize | nucleus | 48.86 | 25.9 |
| KXG27016 | Sorghum | cytosol, nucleus, plastid | 47.73 | 24.28 |
| HORVU2Hr1G106030.2 | Barley | cytosol, mitochondrion, nucleus | 14.2 | 24.27 |
| Zm00001d017677_P001 | Maize | nucleus | 48.86 | 23.5 |
| Zm00001d009778_P001 | Maize | nucleus | 26.14 | 21.0 |
| CDY03201 | Canola | cytosol | 21.59 | 20.99 |
| VIT_02s0012g01450.t01 | Wine grape | nucleus | 37.5 | 20.95 |
| KRH75598 | Soybean | nucleus | 35.8 | 20.79 |
| GSMUA_Achr11P... | Banana | nucleus | 35.23 | 20.67 |
| Zm00001d020790_P001 | Maize | nucleus | 38.64 | 20.48 |
| KRH45428 | Soybean | nucleus | 35.23 | 20.46 |
| Zm00001d048229_P001 | Maize | nucleus | 41.48 | 20.45 |
| Zm00001d027987_P001 | Maize | nucleus | 38.07 | 20.24 |
| Zm00001d005939_P001 | Maize | nucleus | 38.07 | 20.12 |
| PGSC0003DMT400045210 | Potato | nucleus | 35.23 | 18.79 |
| Bra025007.1-P | Field mustard | nucleus | 28.98 | 18.61 |
| Zm00001d018119_P001 | Maize | nucleus | 36.93 | 18.47 |
| Solyc08g076820.2.1 | Tomato | nucleus | 34.09 | 18.29 |
| Zm00001d052192_P001 | Maize | nucleus | 35.8 | 18.26 |
| Bra017533.1-P | Field mustard | nucleus | 28.98 | 17.65 |
| Zm00001d027419_P001 | Maize | nucleus | 29.55 | 16.72 |
| CDY35175 | Canola | nucleus | 27.84 | 16.67 |
| CDY63053 | Canola | nucleus | 29.55 | 16.05 |
| CDX77682 | Canola | nucleus | 28.98 | 15.74 |
| AT5G46690.1 | Thale cress | nucleus | 28.98 | 15.6 |
| Zm00001d048478_P001 | Maize | nucleus | 27.27 | 14.81 |
| Zm00001d009715_P001 | Maize | nucleus | 26.14 | 11.0 |
| Zm00001d016095_P001 | Maize | nucleus | 24.43 | 10.94 |
| Zm00001d053391_P001 | Maize | cytosol, nucleus, plastid | 23.3 | 10.93 |
| Zm00001d046096_P001 | Maize | nucleus | 21.02 | 10.69 |
Protein Annotations
| MapMan:15.5.32 | UniProt:A0A1D6E1J0 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| ProteinID:ONM14539.1 | PFAM:PF00010 | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF31 | SUPFAM:SSF47459 | TMHMM:TMhelix |
| UniParc:UPI0008453B1F | EnsemblPlantsGene:Zm00001d002492 | EnsemblPlants:Zm00001d002492_P001 | EnsemblPlants:Zm00001d002492_T001 | InterPro:bHLH_dom | SEG:seg |
Description
Transcription factor bHLH71
Coordinates
chr2:-:13941160..13942003
Molecular Weight (calculated)
18768.6 Da
IEP (calculated)
10.091
GRAVY (calculated)
0.019
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHIAVERNR RRQVNEYLAP LRSLMPGLLR PPGRDPASAG SSGAGVTADA AARSEGAAPH EARPPAFARF FRYPQYAWRH AAAREDGVVA VEDEASGDCA
101: VADVEVGLVV DAHASLRVMA PRRPGQLLRL VAGVQALGLA VVHLNVATAP DAMALYTLSL RVRTTSTHVR FLMSIA
101: VADVEVGLVV DAHASLRVMA PRRPGQLLRL VAGVQALGLA VVHLNVATAP DAMALYTLSL RVRTTSTHVR FLMSIA
001: MALEAVVYPQ DPFSYISCKD FPFYDLYFQE EEDQDPQDTK NNIKLGQGQG HGFASNNYNG RTGDYSDDYN YNEEDLQWPR DLPYGSAVDT ESQPPPSDVA
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS
Arabidopsis Description
BHLH96Transcription factor bHLH96 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.