Factsheet for HORVU2Hr1G106030.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion	58.25	31.75
TraesCS2A01G448800.1	Wheat	nucleus	89.32	27.79
TraesCS2B01G469800.1	Wheat	nucleus	87.38	27.52
TraesCS2B01G469700.1	Wheat	nucleus	87.38	27.52
TraesCS2D01G448000.1	Wheat	nucleus	88.35	27.49
GSMUA_Achr11P...	Banana	nucleus	70.87	24.33
HORVU6Hr1G067000.2	Barley	nucleus	75.73	22.48
KRH45428	Soybean	nucleus	65.05	22.11
KRH75598	Soybean	nucleus	64.08	21.78
Bra025007.1-P	Field mustard	nucleus	56.31	21.17
VIT_02s0012g01450.t01	Wine grape	nucleus	64.08	20.95
Solyc08g076820.2.1	Tomato	nucleus	64.08	20.12
Bra017533.1-P	Field mustard	nucleus	56.31	20.07
PGSC0003DMT400045210	Potato	nucleus	64.08	20.0
Zm00001d026046_P001	Maize	nucleus	65.05	19.94
HORVU6Hr1G081120.4	Barley	nucleus	65.05	19.36
CDY35175	Canola	nucleus	54.37	19.05
CDY03201	Canola	cytosol	33.01	18.78
KXG27015	Sorghum	cytosol	62.14	18.66
HORVU2Hr1G020990.1	Barley	nucleus	42.72	18.49
CDX77682	Canola	nucleus	57.28	18.21
AT5G46690.1	Thale cress	nucleus	57.28	18.04
CDY63053	Canola	nucleus	56.31	17.9
HORVU4Hr1G084850.2	Barley	extracellular	48.54	16.5
Zm00001d002492_P001	Maize	mitochondrion	24.27	14.2
HORVU4Hr1G078270.2	Barley	plastid	59.22	13.8
KXG27016	Sorghum	cytosol, nucleus, plastid	45.63	13.58
HORVU1Hr1G071330.3	Barley	nucleus	57.28	13.53
HORVU5Hr1G070000.3	Barley	nucleus, plastid	60.19	13.14
HORVU7Hr1G079250.1	Barley	cytosol	40.78	11.51

Protein Annotations

EnsemblPlants:HORVU2Hr1G106030.2	EnsemblPlantsGene:HORVU2Hr1G106030	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	ncoils:Coil
PANTHER:PTHR11969	PANTHER:PTHR11969:SF31	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000B46C941	UniProt:A0A287JBJ4	MapMan:15.5.32	:	:

Description

No Description!

Coordinates

chrchr2H:+:708355239..708356004

Molecular Weight (calculated)

12015.4 Da

IEP (calculated)

10.646

GRAVY (calculated)

-0.986

Length

103 amino acids

Sequence
(BLAST)

001: RRRARSCKNR EEAESQRMTH IAIERNRRRQ MNEYLAVLRS LMPESYSRRG DQASIVGGAI DFVKELEQLL QSLEAQKRTL LAEQQQEHRP LPNRDAMPLP
101: SAT

Best Arabidopsis Sequence Match ( AT3G24140.1 )
(BLAST)

001: MDKDYSAPNF LGESSGGNDD NSSGMIDYMF NRNLQQQQKQ SMPQQQQHQL SPSGFGATPF DKMNFSDVMQ FADFGSKLAL NQTRNQDDQE TGIDPVYFLK
101: FPVLNDKIED HNQTQHLMPS HQTSQEGGEC GGNIGNVFLE EKEDQDDDND NNSVQLRFIG GEEEDRENKN VTKKEVKSKR KRARTSKTSE EVESQRMTHI
201: AVERNRRKQM NEHLRVLRSL MPGSYVQRGD QASIIGGAIE FVRELEQLLQ CLESQKRRRI LGETGRDMTT TTTSSSSPIT TVANQAQPLI ITGNVTELEG
301: GGGLREETAE NKSCLADVEV KLLGFDAMIK ILSRRRPGQL IKTIAALEDL HLSILHTNIT TMEQTVLYSF NVKITSETRF TAEDIASSIQ QIFSFIHANT
401: NISGSSNLGN IVFT

Arabidopsis Description

FAMAFMA [Source:UniProtKB/TrEMBL;Acc:A0A178VKX8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.