Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63053 | Canola | nucleus | 85.02 | 85.8 |
| Bra025007.1-P | Field mustard | nucleus | 71.56 | 85.4 |
| CDX77682 | Canola | nucleus | 84.4 | 85.19 |
| CDY03201 | Canola | cytosol | 44.34 | 80.11 |
| Bra017533.1-P | Field mustard | nucleus | 67.89 | 76.82 |
| CDY35175 | Canola | nucleus | 66.67 | 74.15 |
| HORVU2Hr1G106030.2 | Barley | cytosol, mitochondrion, nucleus | 18.04 | 57.28 |
| GSMUA_Achr11P... | Banana | mitochondrion | 31.8 | 55.03 |
| VIT_02s0012g01450.t01 | Wine grape | nucleus | 47.71 | 49.52 |
| Solyc08g076820.2.1 | Tomato | nucleus | 47.09 | 46.95 |
| KRH75598 | Soybean | nucleus | 43.43 | 46.86 |
| PGSC0003DMT400045210 | Potato | nucleus | 47.09 | 46.67 |
| KRH45428 | Soybean | nucleus | 42.81 | 46.2 |
| GSMUA_Achr11P... | Banana | nucleus | 39.45 | 43.0 |
| AT1G72210.1 | Thale cress | nucleus | 36.7 | 37.5 |
| TraesCS2A01G448800.1 | Wheat | nucleus | 36.7 | 36.25 |
| TraesCS2B01G469700.1 | Wheat | nucleus | 36.09 | 36.09 |
| TraesCS2B01G469800.1 | Wheat | nucleus | 36.09 | 36.09 |
| TraesCS6A01G264200.1 | Wheat | nucleus | 37.0 | 36.01 |
| TraesCS2D01G448000.1 | Wheat | nucleus | 36.09 | 35.65 |
| TraesCS6D01G250700.1 | Wheat | nucleus | 37.0 | 34.87 |
| TraesCS6B01G291200.1 | Wheat | nucleus | 35.78 | 34.82 |
| EES07423 | Sorghum | nucleus | 36.39 | 34.1 |
| Zm00001d051509_P001 | Maize | nucleus | 34.56 | 34.04 |
| HORVU6Hr1G067000.2 | Barley | nucleus | 35.78 | 33.72 |
| AT1G22490.2 | Thale cress | nucleus | 33.03 | 33.13 |
| Zm00001d026046_P001 | Maize | nucleus | 33.64 | 32.74 |
| AT4G01460.2 | Thale cress | nucleus | 31.5 | 32.7 |
| KXG27015 | Sorghum | cytosol | 33.64 | 32.07 |
| Os02t0691500-01 | Rice | nucleus | 36.39 | 31.9 |
| Zm00001d017677_P001 | Maize | nucleus | 34.86 | 31.15 |
| AT5G65320.1 | Thale cress | nucleus | 28.13 | 31.08 |
| AT3G06120.1 | Thale cress | nucleus | 18.35 | 29.7 |
| Zm00001d002492_P001 | Maize | mitochondrion | 15.6 | 28.98 |
| KXG27016 | Sorghum | cytosol, nucleus, plastid | 29.05 | 27.46 |
| AT3G61950.1 | Thale cress | nucleus | 26.91 | 24.58 |
| AT3G24140.1 | Thale cress | nucleus | 30.58 | 24.15 |
| AT2G46810.1 | Thale cress | nucleus | 27.22 | 23.99 |
| AT5G53210.1 | Thale cress | nucleus | 23.55 | 21.15 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:834712 | EMBL:AB493780 | ProteinID:AED95414.1 | EMBL:AF488603 |
| EMBL:AK221613 | ArrayExpress:AT5G46690 | EnsemblPlantsGene:AT5G46690 | RefSeq:AT5G46690 | TAIR:AT5G46690 | RefSeq:AT5G46690-TAIR-G |
| EnsemblPlants:AT5G46690.1 | TAIR:AT5G46690.1 | EMBL:AY087479 | ProteinID:BAB08913.1 | EMBL:BT025663 | UniProt:C0SVS7 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | RefSeq:NP_001331893.1 | RefSeq:NP_568666.1 |
| PFAM:PF00010 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 |
| PO:PO:0025022 | PFscan:PS50888 | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF31 | UniProt:Q56XR0 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0000162833 | Symbol:bHLH071 | InterPro:bHLH_dom | SEG:seg | : |
Description
BHLH71Transcription factor bHLH71 [Source:UniProtKB/Swiss-Prot;Acc:Q56XR0]
Coordinates
chr5:+:18945543..18947637
Molecular Weight (calculated)
36649.4 Da
IEP (calculated)
7.041
GRAVY (calculated)
-0.542
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLEALSSNG LLNFLLSETL SPTPFKSLVD LEPLPENDVI ISKNTISEIS NQEPPPQRQP PATNRGKKRR RRKPRVCKNE EEAENQRMTH IAVERNRRRQ
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVEESC QLSSVDDIAG AVHHMLSIIE
301: EEPFCCSSMS ELPFDFSLNH SNVTHSL
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVEESC QLSSVDDIAG AVHHMLSIIE
301: EEPFCCSSMS ELPFDFSLNH SNVTHSL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.