Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G469700.1 | Wheat | nucleus | 100.0 | 100.0 |
| TraesCS2A01G448800.1 | Wheat | nucleus | 91.13 | 90.03 |
| TraesCS2D01G448000.1 | Wheat | nucleus | 90.21 | 89.12 |
| HORVU2Hr1G106030.2 | Barley | cytosol, mitochondrion, nucleus | 27.52 | 87.38 |
| GSMUA_Achr11P... | Banana | mitochondrion | 35.47 | 61.38 |
| TraesCS6B01G291200.1 | Wheat | nucleus | 60.24 | 58.63 |
| Zm00001d026046_P001 | Maize | nucleus | 53.21 | 51.79 |
| GSMUA_Achr11P... | Banana | nucleus | 47.09 | 51.33 |
| KXG27015 | Sorghum | cytosol | 51.38 | 48.98 |
| Zm00001d002492_P001 | Maize | mitochondrion | 25.99 | 48.3 |
| KRH45428 | Soybean | nucleus | 41.59 | 44.88 |
| KRH75598 | Soybean | nucleus | 41.59 | 44.88 |
| TraesCS6B01G346100.1 | Wheat | nucleus | 42.81 | 43.89 |
| VIT_02s0012g01450.t01 | Wine grape | nucleus | 41.28 | 42.86 |
| TraesCS4B01G304500.1 | Wheat | nucleus | 40.06 | 42.39 |
| Solyc08g076820.2.1 | Tomato | nucleus | 42.51 | 42.38 |
| PGSC0003DMT400045210 | Potato | nucleus | 42.51 | 42.12 |
| TraesCS6B01G366200.1 | Wheat | nucleus | 42.81 | 40.46 |
| TraesCS5B01G245900.1 | Wheat | nucleus | 40.98 | 38.95 |
| CDY03201 | Canola | cytosol | 21.1 | 38.12 |
| KXG27016 | Sorghum | cytosol, nucleus, plastid | 39.76 | 37.57 |
| Bra025007.1-P | Field mustard | nucleus | 30.89 | 36.86 |
| Bra017533.1-P | Field mustard | nucleus | 32.11 | 36.33 |
| AT5G46690.1 | Thale cress | nucleus | 36.09 | 36.09 |
| CDX77682 | Canola | nucleus | 35.47 | 35.8 |
| CDY35175 | Canola | nucleus | 32.11 | 35.71 |
| CDY63053 | Canola | nucleus | 35.17 | 35.49 |
| TraesCS2B01G141600.1 | Wheat | plastid | 22.63 | 31.09 |
| TraesCS4B01G347100.1 | Wheat | extracellular | 28.44 | 31.0 |
| TraesCS1B01G300100.1 | Wheat | nucleus | 30.58 | 23.98 |
| TraesCS7B01G232000.1 | Wheat | cytosol | 23.55 | 21.15 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G469800.1 | EnsemblPlantsGene:TraesCS2B01G469800 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF31 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | TIGR:cd00083 | MapMan:15.5.32 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:666093332..666096475
Molecular Weight (calculated)
35003.4 Da
IEP (calculated)
5.644
GRAVY (calculated)
-0.220
Length
327 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLDALCAAS DVLVYDTFNA AAAASAAPAD SSLLFGDEAW MAGSASAAAP AVTAVPVEEG EKAQGRRKRR RRARSCKNRE DAESQRMTHI AVERNRRRQM
101: NEYLAALRSL MPESYAHRGD QASIVGGAID FVKELEQLLQ SLEAQKRTLL AQPEQEHKPL PIRDAMPSSS TTVAAAAAAT TTSTDEGKQA AATHDTTGPP
201: FAGFFTYPQY VRLLPPRDDA DDRAGAADIE VTLVETHASV RVMAPRRPGQ LLRMVAGMEA LRLTVLHLNV TTLGSLALYS LSVKVEEGCG LTTADDIAAA
301: VHHVLCLVDA EETSQRLPAG GQQEILS
101: NEYLAALRSL MPESYAHRGD QASIVGGAID FVKELEQLLQ SLEAQKRTLL AQPEQEHKPL PIRDAMPSSS TTVAAAAAAT TTSTDEGKQA AATHDTTGPP
201: FAGFFTYPQY VRLLPPRDDA DDRAGAADIE VTLVETHASV RVMAPRRPGQ LLRMVAGMEA LRLTVLHLNV TTLGSLALYS LSVKVEEGCG LTTADDIAAA
301: VHHVLCLVDA EETSQRLPAG GQQEILS
001: MTLEALSSNG LLNFLLSETL SPTPFKSLVD LEPLPENDVI ISKNTISEIS NQEPPPQRQP PATNRGKKRR RRKPRVCKNE EEAENQRMTH IAVERNRRRQ
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVEESC QLSSVDDIAG AVHHMLSIIE
301: EEPFCCSSMS ELPFDFSLNH SNVTHSL
101: MNQHLSVLRS LMPQPFAHKG DQASIVGGAI DFIKELEHKL LSLEAQKHHN AKLNQSVTSS TSQDSNGEQE NPHQPSSLSL SQFFLHSYDP SQENRNGSTS
201: SVKTPMEDLE VTLIETHANI RILSRRRGFR WSTLATTKPP QLSKLVASLQ SLSLSILHLS VTTLDNYAIY SISAKVEESC QLSSVDDIAG AVHHMLSIIE
301: EEPFCCSSMS ELPFDFSLNH SNVTHSL
Arabidopsis Description
BHLH71Transcription factor bHLH71 [Source:UniProtKB/Swiss-Prot;Acc:Q56XR0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.