Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G342000.1 | Wheat | extracellular | 98.0 | 97.03 |
| TraesCS5A01G515800.1 | Wheat | extracellular | 97.67 | 96.7 |
| HORVU4Hr1G084850.2 | Barley | extracellular | 94.33 | 93.4 |
| Os03t0122100-00 | Rice | mitochondrion, nucleus, plastid | 80.67 | 77.81 |
| Zm00001d027419_P001 | Maize | nucleus | 74.33 | 71.7 |
| OQU93358 | Sorghum | nucleus | 75.33 | 69.97 |
| Zm00001d048478_P001 | Maize | nucleus | 70.0 | 64.81 |
| GSMUA_Achr11P... | Banana | nucleus | 40.33 | 42.46 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 41.0 | 42.12 |
| GSMUA_Achr11P... | Banana | nucleus | 44.67 | 40.61 |
| Bra037414.1-P | Field mustard | nucleus | 37.0 | 35.69 |
| CDY51710 | Canola | nucleus | 37.0 | 35.69 |
| CDY07143 | Canola | nucleus | 36.67 | 35.48 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 43.0 | 35.25 |
| Bra004505.1-P | Field mustard | nucleus | 30.67 | 33.95 |
| AT4G01460.2 | Thale cress | nucleus | 35.33 | 33.65 |
| CDY27521 | Canola | nucleus | 33.33 | 32.26 |
| CDY11386 | Canola | nucleus | 30.0 | 32.26 |
| CDY68483 | Canola | nucleus | 34.33 | 32.19 |
| Bra007644.1-P | Field mustard | nucleus | 29.67 | 31.9 |
| CDX80049 | Canola | nucleus | 32.33 | 30.99 |
| CDY55926 | Canola | nucleus | 33.33 | 30.96 |
| CDY41561 | Canola | nucleus | 32.0 | 30.77 |
| CDX76598 | Canola | nucleus | 32.0 | 30.48 |
| CDY48013 | Canola | nucleus | 32.0 | 30.19 |
| Bra040483.1-P | Field mustard | nucleus | 32.0 | 30.19 |
| TraesCS2B01G141600.1 | Wheat | plastid | 23.67 | 29.83 |
| TraesCS4B01G304500.1 | Wheat | nucleus | 30.67 | 29.77 |
| VIT_15s0048g02510.t01 | Wine grape | nucleus | 35.33 | 29.36 |
| KRH47774 | Soybean | nucleus | 37.33 | 29.17 |
| TraesCS6B01G346100.1 | Wheat | nucleus | 31.0 | 29.15 |
| TraesCS6B01G291200.1 | Wheat | nucleus | 32.33 | 28.87 |
| CDY55929 | Canola | nucleus | 32.0 | 28.74 |
| TraesCS2B01G469700.1 | Wheat | nucleus | 31.0 | 28.44 |
| TraesCS2B01G469800.1 | Wheat | nucleus | 31.0 | 28.44 |
| AT3G61950.1 | Thale cress | nucleus | 33.67 | 28.21 |
| AT2G46810.1 | Thale cress | nucleus | 34.67 | 28.03 |
| KRH06347 | Soybean | nucleus | 36.67 | 27.64 |
| TraesCS5B01G245900.1 | Wheat | nucleus | 31.33 | 27.33 |
| TraesCS6B01G366200.1 | Wheat | nucleus | 31.0 | 26.88 |
| TraesCS1B01G300100.1 | Wheat | nucleus | 25.0 | 17.99 |
| TraesCS7B01G232000.1 | Wheat | cytosol | 21.0 | 17.31 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G347100.1 | EnsemblPlantsGene:TraesCS4B01G347100 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR11969 | PANTHER:PTHR11969:SF20 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | TIGR:cd00083 | MapMan:15.5.32 | : | : | : |
Description
No Description!
Coordinates
chr4B:-:640822447..640824730
Molecular Weight (calculated)
31689.2 Da
IEP (calculated)
8.399
GRAVY (calculated)
-0.039
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MERMQLQGPI ITSLCWADQA AASASAAQVP FLALLQGAAM GDGGPGVKRE SYGAAACRPA ASDVDLLESC VTQLPVPPVV EAPAAKRRKR PRARPRAPPP
101: EKRKKPEEAE CQRMTHIAVE RNRRRLMNDH LASLRALIPS DYIPRGDQAT VVGGAIDYVK QLEQQLVALQ ALAAAQRGEG PVGTAATAAS DGVFVSPQYT
201: SFSQAGGVGS GVDVEAMAAV GGHVRLRVAG RRWPGRLVRA VAAMENLRMA VLHLAVTSVG HDAVVYCFNL KMEDGCEVST ADEVATVVHQ IFAYAAGSCC
101: EKRKKPEEAE CQRMTHIAVE RNRRRLMNDH LASLRALIPS DYIPRGDQAT VVGGAIDYVK QLEQQLVALQ ALAAAQRGEG PVGTAATAAS DGVFVSPQYT
201: SFSQAGGVGS GVDVEAMAAV GGHVRLRVAG RRWPGRLVRA VAAMENLRMA VLHLAVTSVG HDAVVYCFNL KMEDGCEVST ADEVATVVHQ IFAYAAGSCC
001: MFVLRVSNQS FKLHQQVQCK DEIFCLDQKV NVRRSLQVQE TVEDHQSFAL EEEEQQLSTP SLLQDTTIPF LQMLQQSEDP SPFLSFKDPS FLALLSLQTL
101: EKPWELENYL PHEVPEFHSP IHSETNHYYH NPSLEGVNEA ISNQELPFNP LENARSRRKR KNNNLASLMT REKRKRRRTK PTKNIEEIES QRMTHIAVER
201: NRRRQMNVHL NSLRSIIPSS YIQRGDQASI VGGAIDFVKI LEQQLQSLEA QKRSQQSDDN KEQIPEDNSL RNISSNKLRA SNKEEQSSKL KIEATVIESH
301: VNLKIQCTRK QGQLLRSIIL LEKLRFTVLH LNITSPTNTS VSYSFNLKME DECNLGSADE ITAAIRQIFD S
101: EKPWELENYL PHEVPEFHSP IHSETNHYYH NPSLEGVNEA ISNQELPFNP LENARSRRKR KNNNLASLMT REKRKRRRTK PTKNIEEIES QRMTHIAVER
201: NRRRQMNVHL NSLRSIIPSS YIQRGDQASI VGGAIDFVKI LEQQLQSLEA QKRSQQSDDN KEQIPEDNSL RNISSNKLRA SNKEEQSSKL KIEATVIESH
301: VNLKIQCTRK QGQLLRSIIL LEKLRFTVLH LNITSPTNTS VSYSFNLKME DECNLGSADE ITAAIRQIFD S
Arabidopsis Description
BHLH70Transcription factor bHLH70 [Source:UniProtKB/Swiss-Prot;Acc:O81037]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.