Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0376900-01 | Rice | nucleus | 56.48 | 55.79 |
| GSMUA_Achr10P... | Banana | mitochondrion | 33.33 | 54.55 |
| GSMUA_Achr2P22310_001 | Banana | nucleus | 38.89 | 52.07 |
| GSMUA_Achr6P10290_001 | Banana | nucleus | 44.75 | 49.83 |
| EER95359 | Sorghum | nucleus | 53.09 | 48.18 |
| EER96894 | Sorghum | nucleus | 45.99 | 44.08 |
| Solyc11g010340.1.1 | Tomato | nucleus | 39.81 | 43.29 |
| PGSC0003DMT400041644 | Potato | nucleus | 30.56 | 41.77 |
| VIT_07s0191g00240.t01 | Wine grape | nucleus | 41.05 | 41.3 |
| KXG30709 | Sorghum | nucleus | 42.9 | 39.71 |
| CDY37820 | Canola | nucleus | 24.38 | 36.24 |
| KXG27015 | Sorghum | cytosol | 37.65 | 35.57 |
| Bra031865.1-P | Field mustard | nucleus | 23.77 | 35.32 |
| EES07423 | Sorghum | nucleus | 36.42 | 33.81 |
| CDY33966 | Canola | nucleus | 30.86 | 33.11 |
| AT5G65320.1 | Thale cress | nucleus | 30.25 | 33.11 |
| KXG22733 | Sorghum | nucleus | 23.77 | 32.35 |
| KXG27016 | Sorghum | cytosol, nucleus, plastid | 32.1 | 30.06 |
| OQU93358 | Sorghum | nucleus | 28.09 | 28.17 |
| KXG22636 | Sorghum | nucleus | 29.94 | 21.23 |
| EER88428 | Sorghum | nucleus | 23.15 | 19.74 |
| EES06610 | Sorghum | nucleus | 23.46 | 19.1 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A109NDP6 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | ProteinID:KXG18952.1 | EnsemblPlants:OQU91887 |
| ProteinID:OQU91887 | ProteinID:OQU91887.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF48 |
| SMART:SM00353 | EnsemblPlantsGene:SORBI_3001G261448 | SUPFAM:SSF47459 | UniParc:UPI0003C73710 | InterPro:bHLH_dom | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:-:34473846..34475775
Molecular Weight (calculated)
35159.4 Da
IEP (calculated)
7.794
GRAVY (calculated)
-0.351
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLDAVVHP SQPQGHLGYG HRDYCSYGAP FFWSDATGHG DNHVPYAGDW DPFLLASLVH NAEESGKVVG SSKASPEREV ALSSAIEPPS SPVMTTTAKR
101: KRRRANKVVK NEEEMESQRM THIAVERNRR RQMNEYLAVL RSLMPPSYGQ RGDQASIVGG AINYVRELEQ LLQSLEVHRS LQEHSSNSKS CNPFAAFFSF
201: PQYSSATSSS HSGAGNHTIK VSAGSSRSPS SSVVTADIEA SMVDGHASVK VQAPRRPRQL LRLAAGLQQL GLTTLHLNVS TAGTMVMYAF SLKVEVDCKL
301: GSVEEIAAAV HEILGRIQDE AGFS
101: KRRRANKVVK NEEEMESQRM THIAVERNRR RQMNEYLAVL RSLMPPSYGQ RGDQASIVGG AINYVRELEQ LLQSLEVHRS LQEHSSNSKS CNPFAAFFSF
201: PQYSSATSSS HSGAGNHTIK VSAGSSRSPS SSVVTADIEA SMVDGHASVK VQAPRRPRQL LRLAAGLQQL GLTTLHLNVS TAGTMVMYAF SLKVEVDCKL
301: GSVEEIAAAV HEILGRIQDE AGFS
001: MALEAVVYPQ DPFSYISCKD FPFYDLYFQE EEDQDPQDTK NNIKLGQGQG HGFASNNYNG RTGDYSDDYN YNEEDLQWPR DLPYGSAVDT ESQPPPSDVA
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE
301: DIAAAVNQIL RRIEEESSFS
Arabidopsis Description
BHLH96Transcription factor bHLH96 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.