Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
- nucleus 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | mitochondrion | 38.85 | 58.08 |
| GSMUA_Achr9P15000_001 | Banana | mitochondrion | 37.84 | 56.28 |
| GSMUA_Achr3P06660_001 | Banana | mitochondrion, nucleus | 35.14 | 55.91 |
| GSMUA_Achr2P22310_001 | Banana | nucleus | 43.24 | 52.89 |
| GSMUA_Achr6P10290_001 | Banana | nucleus | 51.01 | 51.89 |
| GSMUA_Achr11P... | Banana | mitochondrion | 31.76 | 49.74 |
| GSMUA_Achr5P17900_001 | Banana | nucleus | 46.28 | 48.58 |
| Solyc11g010340.1.1 | Tomato | nucleus | 47.97 | 47.65 |
| GSMUA_Achr10P... | Banana | nucleus | 48.99 | 46.93 |
| VIT_07s0191g00240.t01 | Wine grape | nucleus | 51.01 | 46.89 |
| GSMUA_Achr6P02150_001 | Banana | nucleus | 50.68 | 43.48 |
| GSMUA_Achr5P05450_001 | Banana | nucleus | 41.89 | 43.21 |
| PGSC0003DMT400041644 | Potato | nucleus | 34.12 | 42.62 |
| GSMUA_Achr7P12790_001 | Banana | nucleus | 45.27 | 40.98 |
| GSMUA_Achr8P28400_001 | Banana | nucleus | 27.03 | 40.2 |
| GSMUA_Achr11P... | Banana | nucleus | 38.51 | 38.0 |
| GSMUA_Achr7P21110_001 | Banana | nucleus | 23.31 | 35.94 |
| CDY37820 | Canola | nucleus | 25.68 | 34.86 |
| GSMUA_Achr7P21190_001 | Banana | nucleus | 23.31 | 34.85 |
| Bra031865.1-P | Field mustard | nucleus | 25.0 | 33.95 |
| AT5G65320.1 | Thale cress | nucleus | 32.09 | 32.09 |
| GSMUA_Achr11P... | Banana | nucleus | 30.07 | 31.23 |
| GSMUA_Achr5P20300_001 | Banana | nucleus | 30.74 | 31.16 |
| CDY33966 | Canola | nucleus | 31.42 | 30.79 |
| GSMUA_Achr2P06030_001 | Banana | nucleus | 32.09 | 29.78 |
| GSMUA_Achr10P... | Banana | nucleus | 25.0 | 28.35 |
| GSMUA_Achr11P... | Banana | nucleus | 30.41 | 27.27 |
| GSMUA_Achr5P06780_001 | Banana | cytosol | 26.01 | 27.21 |
| GSMUA_Achr8P19870_001 | Banana | cytosol, golgi, nucleus | 27.03 | 25.72 |
| GSMUA_Achr8P12330_001 | Banana | golgi, vacuole | 31.42 | 25.41 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P17650_001 | EnsemblPlants:GSMUA_Achr8T17650_001 | EnsemblPlantsGene:GSMUA_Achr8G17650_001 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| ncoils:Coil | PANTHER:PTHR11969 | PANTHER:PTHR11969:SF26 | PFAM:PF00010 | PFscan:PS50888 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000295172D | UniProt:M0TRB8 | MapMan:15.5.32 | : | : |
Description
Putative Transcription factor bHLH96 [Source:GMGC_GENE;Acc:GSMUA_Achr8G17650_001]
Coordinates
chr8:-:18057078..18058328
Molecular Weight (calculated)
32875.2 Da
IEP (calculated)
6.066
GRAVY (calculated)
-0.436
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MALEAVVFSQ GLFGYACKES CTTPGGGACG YDLGDVSMEA KSSMLDGDMD RTRYPSCSDL VQDLEGWHAN YSTAEGQEEA PAEGKATEVV SRRKRPRTKG
101: IKNKEEVESQ RMVHIAVERN RRKQMNEYLA VLRSLMPPSY VPRGDQASIV GGAINYVKEL EQLLQSIQVQ KQLEQRADTD GNQNGVANVD KDYSGNEVMV
201: VKRSAMADIE VTIVESHVNL KVLSRRHPKQ LSKLLTWLQN LRLTPLHLNV TTANERVLYS FSLKVEDDCS YASVTQIAAA VCEMIGRIRE ENIGLS
101: IKNKEEVESQ RMVHIAVERN RRKQMNEYLA VLRSLMPPSY VPRGDQASIV GGAINYVKEL EQLLQSIQVQ KQLEQRADTD GNQNGVANVD KDYSGNEVMV
201: VKRSAMADIE VTIVESHVNL KVLSRRHPKQ LSKLLTWLQN LRLTPLHLNV TTANERVLYS FSLKVEDDCS YASVTQIAAA VCEMIGRIRE ENIGLS
001: MALEAVVYPQ DPFSYISCKD FPFYDLYFQE EEDQDPQDTK NNIKLGQGQG HGFASNNYNG RTGDYSDDYN YNEEDLQWPR DLPYGSAVDT ESQPPPSDVA
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV HFFLSFSPFF
301: VFFFLTRLE
101: AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT
201: TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV HFFLSFSPFF
301: VFFFLTRLE
Arabidopsis Description
BHLH96Transcription factor bHLH96 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7T4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.