CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
mitochondrion 1
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion, nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045336_P001	Maize	plasma membrane	94.72	94.72
Os06t0150400-01	Rice	endoplasmic reticulum, golgi	84.16	83.33
TraesCS7D01G098600.1	Wheat	endoplasmic reticulum	79.87	79.08
TraesCS7A01G104800.1	Wheat	endoplasmic reticulum	79.54	78.76
TraesCS4A01G402800.1	Wheat	extracellular	77.56	77.3
TraesCS4A01G402700.1	Wheat	nucleus	27.06	74.55
TraesCS7A01G104400.1	Wheat	nucleus	26.07	71.17
TraesCS7D01G098400.1	Wheat	nucleus	23.43	71.0
GSMUA_Achr2P15670_001	Banana	endoplasmic reticulum, golgi, vacuole	58.75	57.79
Bra010324.1-P	Field mustard	endoplasmic reticulum	57.43	57.05
CDY14207	Canola	endoplasmic reticulum	57.1	56.72
KRH74165	Soybean	endoplasmic reticulum	56.11	56.11
KRH49042	Soybean	endoplasmic reticulum, golgi	55.45	56.0
VIT_11s0016g02520.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	54.79	55.15
AT4G29520.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	54.46	53.92
CDY06801	Canola	endoplasmic reticulum	54.79	53.04
PGSC0003DMT400021734	Potato	endoplasmic reticulum, extracellular, golgi	51.82	51.99
CDY03573	Canola	endoplasmic reticulum, mitochondrion	56.77	51.96
Bra011119.1-P	Field mustard	endoplasmic reticulum, extracellular	53.14	51.94
CDY43511	Canola	endoplasmic reticulum, extracellular	53.14	51.94
Solyc07g032250.2.1	Tomato	nucleus	51.49	51.83
GSMUA_Achr6P26550_001	Banana	plastid	47.85	48.33

Protein Annotations

EnsemblPlants:KXG19314	EnsemblPlantsGene:SORBI_3010G040100	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005886	GO:GO:0016020	PANTHER:PTHR36058	ProteinID:KXG19314	ProteinID:KXG19314.1
SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001C8062B	UniProt:A0A194YH65	MapMan:35.2

Description

hypothetical protein

Coordinates

chr10:-:3137076..3139878

Molecular Weight (calculated)

33798.6 Da

IEP (calculated)

8.190

GRAVY (calculated)

-0.717

Length

303 amino acids

Sequence
(BLAST)

001: MASRAVALLV AVALAAFLLH PAAAAAGQKK PATAARREDI PYIRCQVCER IAREISAQVA KKQQALPPSK KVPEIEIIEI AENVCNLKKQ EADWMLRIDI
101: VEKGDKLQLV EQDEEGHCNA ECKTIERACQ EVIGYADTDI AEFVYKNNPS ADQLMKFLCK DLSKACAKDP PPVPKDRVPG EPFARKPSKD AEMEKILKSM
201: EGMPGAPSMK MYSRDDLMKN NFGTEDDDDE DDEDEDDNFP KNLGKALKDK GSQKKDLKQQ VVQQFKDTSK KLKGHVNKVS NVVKKWWKGA KKPAKSSKSK
301: TEL

Best Arabidopsis Sequence Match ( AT4G29520.1 )
(BLAST)

001: MVVMNRVLVA LTLALLASSA LLPVSDAAKK PSSTPRKEDV PYIKCQVCEK LSSRLHQLVK EKQQQISPKK ISEYEIIEIA ENVCNLKKEE ADWMLKIDIV
101: EKGDNLVLVE QQEEGMCNSK CKTIENACQK VIGYSDTDVA EYIYKSKPDL VSLVNHLCKD LTDACSKKPP PVPKDRVPGE PFVAKPSKDA EMDKILRSMQ
201: GMPGAPGMKV YSREDIEKGN IGNEDDDGDD DEDEEEDDKF PKNLGKVLKE KESKTEELKK TITKEFKKKG EALKRHAQKV SNRVRRWWKG LGSSSSKKPK
301: SGKSEL

Arabidopsis Description

Nucleophosmin [Source:UniProtKB/TrEMBL;Acc:Q9SU93]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.