Factsheet for Os06t0150400-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19314	Sorghum	endoplasmic reticulum	83.33	84.16
Zm00001d045336_P001	Maize	plasma membrane	81.05	81.85
TraesCS7D01G098600.1	Wheat	endoplasmic reticulum	77.45	77.45
TraesCS7A01G104800.1	Wheat	endoplasmic reticulum	77.45	77.45
TraesCS4A01G402800.1	Wheat	extracellular	75.16	75.66
TraesCS4A01G402700.1	Wheat	nucleus	26.47	73.64
TraesCS7A01G104400.1	Wheat	nucleus	26.14	72.07
TraesCS7D01G098400.1	Wheat	nucleus	23.53	72.0
GSMUA_Achr2P15670_001	Banana	endoplasmic reticulum, golgi, vacuole	58.5	58.12
CDY14207	Canola	endoplasmic reticulum	57.19	57.38
KRH49042	Soybean	endoplasmic reticulum, golgi	56.21	57.33
Bra010324.1-P	Field mustard	endoplasmic reticulum	56.86	57.05
KRH74165	Soybean	endoplasmic reticulum	55.23	55.78
AT4G29520.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	54.9	54.9
VIT_11s0016g02520.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	53.92	54.82
PGSC0003DMT400021734	Potato	endoplasmic reticulum, extracellular, golgi	52.94	53.64
CDY06801	Canola	endoplasmic reticulum	54.58	53.35
Bra011119.1-P	Field mustard	endoplasmic reticulum, extracellular	53.92	53.23
Solyc07g032250.2.1	Tomato	nucleus	52.29	53.16
CDY43511	Canola	endoplasmic reticulum, extracellular	53.59	52.9
CDY03573	Canola	endoplasmic reticulum, mitochondrion	56.21	51.96
GSMUA_Achr6P26550_001	Banana	plastid	47.71	48.67

Protein Annotations

EnsemblPlants:Os06t0150400-01	EnsemblPlantsGene:Os06g0150400	EntrezGene:4340145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0016020	PANTHER:PTHR36058	ProteinID:BAD69047.1
ProteinID:BAD69311.1	ProteinID:BAF18737.1	ProteinID:BAS96182.1	RefSeq:XP_015642975.1	SEG:seg	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0000458032	UniProt:Q5VML4	MapMan:35.2	:	:

Description

Conserved hypothetical protein. (Os06t0150400-01)

Coordinates

chr6:-:2589059..2592248

Molecular Weight (calculated)

33662.6 Da

IEP (calculated)

7.676

GRAVY (calculated)

-0.565

Length

306 amino acids

Sequence
(BLAST)

001: MARGGGVAVA MAVAVAAVVL LLHPAASAAA AGPKKVATAA RKEDIPYIRC QVCERIAREI SAQVAKKQQA LPATKKVPEI EIIEIAENVC NLKKQEADWM
101: LKIDIVEKGD KLELVEQDEE GHCNAECKTI ERACQEVMGY ADTDVAEFVY KKKPSADQLV KFLCKDLSEA CVVDPPPVPK DRVPGEPFAA KPSKDAEMDR
201: ILKSMEGIPG APSMKMYSRD DLMKNNFGVD GDDDDDDEDE DDDFPKNLGK VFKDKGSPKK DLKQQVVKQI KDTGKKLKGH VNKVSKVVKK WWQGKKKPSK
301: SSKTEL

Best Arabidopsis Sequence Match ( AT4G29520.1 )
(BLAST)

001: MVVMNRVLVA LTLALLASSA LLPVSDAAKK PSSTPRKEDV PYIKCQVCEK LSSRLHQLVK EKQQQISPKK ISEYEIIEIA ENVCNLKKEE ADWMLKIDIV
101: EKGDNLVLVE QQEEGMCNSK CKTIENACQK VIGYSDTDVA EYIYKSKPDL VSLVNHLCKD LTDACSKKPP PVPKDRVPGE PFVAKPSKDA EMDKILRSMQ
201: GMPGAPGMKV YSREDIEKGN IGNEDDDGDD DEDEEEDDKF PKNLGKVLKE KESKTEELKK TITKEFKKKG EALKRHAQKV SNRVRRWWKG LGSSSSKKPK
301: SGKSEL

Arabidopsis Description

Nucleophosmin [Source:UniProtKB/TrEMBL;Acc:Q9SU93]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.