Factsheet for TraesCS7A01G104800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G402700.1	Wheat	nucleus	35.62	99.09
TraesCS7D01G098600.1	Wheat	endoplasmic reticulum	96.73	96.73
TraesCS4A01G402800.1	Wheat	extracellular	92.48	93.09
TraesCS7A01G104400.1	Wheat	nucleus	30.39	83.78
Zm00001d045336_P001	Maize	plasma membrane	79.08	79.87
KXG19314	Sorghum	endoplasmic reticulum	78.76	79.54
Os06t0150400-01	Rice	endoplasmic reticulum, golgi	77.45	77.45
KRH74165	Soybean	endoplasmic reticulum	54.9	55.45
VIT_11s0016g02520.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	53.92	54.82
GSMUA_Achr2P15670_001	Banana	endoplasmic reticulum, golgi, vacuole	54.9	54.55
CDY14207	Canola	endoplasmic reticulum	53.92	54.1
KRH49042	Soybean	endoplasmic reticulum, golgi	52.94	54.0
Bra010324.1-P	Field mustard	endoplasmic reticulum	53.59	53.77
AT4G29520.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	52.29	52.29
PGSC0003DMT400021734	Potato	endoplasmic reticulum, extracellular, golgi	50.65	51.32
Solyc07g032250.2.1	Tomato	nucleus	50.33	51.16
CDY06801	Canola	endoplasmic reticulum	52.29	51.12
CDY43511	Canola	endoplasmic reticulum, extracellular	51.31	50.65
Bra011119.1-P	Field mustard	endoplasmic reticulum, extracellular	50.98	50.32
CDY03573	Canola	endoplasmic reticulum, mitochondrion	52.94	48.94
GSMUA_Achr6P26550_001	Banana	plastid	44.77	45.67

Protein Annotations

EnsemblPlants:TraesCS7A01G104800.1	EnsemblPlantsGene:TraesCS7A01G104800	PANTHER:PTHR36058	SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:63708073..63710798

Molecular Weight (calculated)

33704.6 Da

IEP (calculated)

6.546

GRAVY (calculated)

-0.577

Length

306 amino acids

Sequence
(BLAST)

001: MARGSAALVV VAVALAAVLL LLVAPAAEAA GQKKPATAAR REDVPYIRCQ VCERIAREIS AQVAAKQQAL PSSKKVPEIE IIDIAENVCN LKKQEADWML
101: RIDIVEKGDK LELVDQDEEG HCNSECKTIE RACQEVMGYA DTDVAEFVYT NKPSVDQLIK FVCKDITKAC AADPPPVPKD RVPGEPFAAK PSKDAEMEKI
201: MRSMEGMPGA PNMKMYSRDD LMKNNFGVEG DEDDEDDDED EDSLPKNLGN ILKNKGPQKK DLKQQVVKQI KDTGKKLKGH VSKVSKAVKN WWKGKKKPAK
301: SSKSEL

Best Arabidopsis Sequence Match ( AT4G29520.1 )
(BLAST)

001: MVVMNRVLVA LTLALLASSA LLPVSDAAKK PSSTPRKEDV PYIKCQVCEK LSSRLHQLVK EKQQQISPKK ISEYEIIEIA ENVCNLKKEE ADWMLKIDIV
101: EKGDNLVLVE QQEEGMCNSK CKTIENACQK VIGYSDTDVA EYIYKSKPDL VSLVNHLCKD LTDACSKKPP PVPKDRVPGE PFVAKPSKDA EMDKILRSMQ
201: GMPGAPGMKV YSREDIEKGN IGNEDDDGDD DEDEEEDDKF PKNLGKVLKE KESKTEELKK TITKEFKKKG EALKRHAQKV SNRVRRWWKG LGSSSSKKPK
301: SGKSEL

Arabidopsis Description

Nucleophosmin [Source:UniProtKB/TrEMBL;Acc:Q9SU93]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.