Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
27297264
plasma membrane: 27341663 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG19314 | Sorghum | endoplasmic reticulum | 94.72 | 94.72 |
| Os06t0150400-01 | Rice | endoplasmic reticulum, golgi | 81.85 | 81.05 |
| TraesCS7D01G098600.1 | Wheat | endoplasmic reticulum | 79.87 | 79.08 |
| TraesCS7A01G104800.1 | Wheat | endoplasmic reticulum | 79.87 | 79.08 |
| TraesCS4A01G402800.1 | Wheat | extracellular | 77.56 | 77.3 |
| TraesCS4A01G402700.1 | Wheat | nucleus | 27.39 | 75.45 |
| TraesCS7A01G104400.1 | Wheat | nucleus | 26.73 | 72.97 |
| TraesCS7D01G098400.1 | Wheat | nucleus | 23.1 | 70.0 |
| GSMUA_Achr2P15670_001 | Banana | endoplasmic reticulum, golgi, vacuole | 57.76 | 56.82 |
| Bra010324.1-P | Field mustard | endoplasmic reticulum | 56.44 | 56.07 |
| CDY14207 | Canola | endoplasmic reticulum | 56.11 | 55.74 |
| KRH49042 | Soybean | endoplasmic reticulum, golgi | 55.12 | 55.67 |
| KRH74165 | Soybean | endoplasmic reticulum | 55.12 | 55.12 |
| VIT_11s0016g02520.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 53.47 | 53.82 |
| AT4G29520.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 53.8 | 53.27 |
| PGSC0003DMT400021734 | Potato | endoplasmic reticulum, extracellular, golgi | 52.48 | 52.65 |
| CDY06801 | Canola | endoplasmic reticulum | 53.8 | 52.08 |
| Solyc07g032250.2.1 | Tomato | nucleus | 51.16 | 51.49 |
| CDY03573 | Canola | endoplasmic reticulum, mitochondrion | 55.78 | 51.06 |
| CDY43511 | Canola | endoplasmic reticulum, extracellular | 52.15 | 50.97 |
| Bra011119.1-P | Field mustard | endoplasmic reticulum, extracellular | 52.15 | 50.97 |
| GSMUA_Achr6P26550_001 | Banana | plastid | 48.51 | 49.0 |
Protein Annotations
| EMBL:BT033283 | EnsemblPlants:Zm00001d045336_P001 | EnsemblPlants:Zm00001d045336_T001 | EnsemblPlantsGene:Zm00001d045336 | EntrezGene:100191245 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005886 | GO:GO:0016020 |
| PANTHER:PTHR36058 | ProteinID:AQL02076.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI00017B6349 |
| UniProt:B4F845 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr9:-:19144565..19150503
Molecular Weight (calculated)
33965.9 Da
IEP (calculated)
8.194
GRAVY (calculated)
-0.732
Length
303 amino acids
Sequence
(BLAST)
(BLAST)
001: MARRAVALLV AVALATVLLH TAEVAAGQKK PATAARREDI PYIRCQVCER IAREISAQVA KKHQALPPSK KVPEIEIIEV AENVCNLKKQ EADWMLRIDI
101: VEKGDKLELV EQDEEGHCNA ECKTIERACQ EVIGYADTDV AEFVYKNNPS VDQLMKFLCK DLSKACAKDP PPVPKDRVPG EPFARKPSKD AEMEKILRSM
201: EGMPGAPSMK MYSRDDLMKN NFGTEDDDEE DDEDEDDNFP KNLGKALKNK GSQKKDLKQQ VVQQFKDTSK KLKGHVNKVS GMVKKWWKGA KKPAKSSKSK
301: TEL
101: VEKGDKLELV EQDEEGHCNA ECKTIERACQ EVIGYADTDV AEFVYKNNPS VDQLMKFLCK DLSKACAKDP PPVPKDRVPG EPFARKPSKD AEMEKILRSM
201: EGMPGAPSMK MYSRDDLMKN NFGTEDDDEE DDEDEDDNFP KNLGKALKNK GSQKKDLKQQ VVQQFKDTSK KLKGHVNKVS GMVKKWWKGA KKPAKSSKSK
301: TEL
001: MVVMNRVLVA LTLALLASSA LLPVSDAAKK PSSTPRKEDV PYIKCQVCEK LSSRLHQLVK EKQQQISPKK ISEYEIIEIA ENVCNLKKEE ADWMLKIDIV
101: EKGDNLVLVE QQEEGMCNSK CKTIENACQK VIGYSDTDVA EYIYKSKPDL VSLVNHLCKD LTDACSKKPP PVPKDRVPGE PFVAKPSKDA EMDKILRSMQ
201: GMPGAPGMKV YSREDIEKGN IGNEDDDGDD DEDEEEDDKF PKNLGKVLKE KESKTEELKK TITKEFKKKG EALKRHAQKV SNRVRRWWKG LGSSSSKKPK
301: SGKSEL
101: EKGDNLVLVE QQEEGMCNSK CKTIENACQK VIGYSDTDVA EYIYKSKPDL VSLVNHLCKD LTDACSKKPP PVPKDRVPGE PFVAKPSKDA EMDKILRSMQ
201: GMPGAPGMKV YSREDIEKGN IGNEDDDGDD DEDEEEDDKF PKNLGKVLKE KESKTEELKK TITKEFKKKG EALKRHAQKV SNRVRRWWKG LGSSSSKKPK
301: SGKSEL
Arabidopsis Description
Nucleophosmin [Source:UniProtKB/TrEMBL;Acc:Q9SU93]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.