Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400054474 | Potato | plastid | 57.07 | 62.29 |
| Solyc02g069510.1.1 | Tomato | nucleus | 57.07 | 60.22 |
| Os04t0516200-01 | Rice | nucleus | 63.35 | 59.9 |
| Os10t0478000-01 | Rice | nucleus | 61.78 | 57.84 |
| Os02t0623400-00 | Rice | nucleus | 60.21 | 55.02 |
| Os06t0672400-01 | Rice | nucleus | 79.06 | 54.51 |
| Os01t0828900-00 | Rice | nucleus, plastid | 60.21 | 54.25 |
| GSMUA_Achr4P31900_001 | Banana | nucleus | 52.88 | 53.72 |
| GSMUA_Achr9P30540_001 | Banana | nucleus | 51.83 | 53.51 |
| GSMUA_AchrUn_... | Banana | nucleus | 58.12 | 53.37 |
| GSMUA_Achr5P00260_001 | Banana | nucleus | 55.5 | 51.96 |
| GSMUA_Achr11P... | Banana | nucleus | 58.64 | 50.45 |
| KRH58368 | Soybean | nucleus | 59.16 | 47.88 |
| Os02t0811000-01 | Rice | nucleus | 61.26 | 47.18 |
| Os05t0472000-00 | Rice | nucleus | 58.64 | 47.06 |
| KRH42251 | Soybean | plastid | 59.16 | 45.75 |
| Os05t0347400-01 | Rice | nucleus | 61.26 | 41.2 |
| Os07t0139300-01 | Rice | nucleus | 54.97 | 38.04 |
| Os08t0248000-00 | Rice | nucleus | 34.55 | 32.67 |
Protein Annotations
| MapMan:35.1 | EMBL:AK106854 | InterPro:ALOG_dom | ProteinID:BAF07916.1 | ProteinID:BAI52979.1 | ProteinID:BAS77155.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009299 | GO:GO:0009416 | GO:GO:0009628 |
| GO:GO:0009653 | GO:GO:0009987 | GO:GO:0090698 | InterPro:IPR006936 | EnsemblPlantsGene:Os02g0166800 | EnsemblPlants:Os02t0166800-01 |
| PFAM:PF04852 | PFscan:PS51697 | PANTHER:PTHR31165 | PANTHER:PTHR31165:SF39 | UniProt:Q0E3M2 | UniParc:UPI0000DF058C |
| SEG:seg | : | : | : | : | : |
Description
G1 LIKE PROTEIN 1Protein of unknown function DUF640 domain containing protein. (Os02t0166800-01)
Coordinates
chr2:+:3594428..3596589
Molecular Weight (calculated)
21193.3 Da
IEP (calculated)
10.537
GRAVY (calculated)
-0.699
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMIGMASPA ESPGGGGTAR PSRYESQKRR DWQTFGQYLR NHRPPLELSR CSGAHVLEFL RYLDQFGKTK VHAHGCPFFG HPSPPAPCPC PLRQAWGSLD
101: ALVGRLRAAF EEHGGRPESN PFGARAVRLY LRDIRDTQSK ARGIAYEKKR RKRAAASHTK QKQQQQQLVE QAAAAAEAHA AGCMMPLSVF N
101: ALVGRLRAAF EEHGGRPESN PFGARAVRLY LRDIRDTQSK ARGIAYEKKR RKRAAASHTK QKQQQQQLVE QAAAAAEAHA AGCMMPLSVF N
001: MDHIIGFMGT TNMSHNTNLM IAAAATTTTT SSSSSSSSGG SGTNQLSRYE NQKRRDWNTF GQYLRNHRPP LSLSRCSGAH VLEFLRYLDQ FGKTKVHTHL
101: CPFFGHPNPP APCACPLRQA WGSLDALIGR LRAAFEENGG SPETNPFGAR AVRLYLREVR DSQAKARGIS YEKKKRKRPP PPLPPAQPAI SSSPN
101: CPFFGHPNPP APCACPLRQA WGSLDALIGR LRAAFEENGG SPETNPFGAR AVRLYLREVR DSQAKARGIS YEKKKRKRPP PPLPPAQPAI SSSPN
Arabidopsis Description
LSH4LSH4 [Source:UniProtKB/TrEMBL;Acc:A0A178VHD2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.