Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58368 | Soybean | nucleus | 89.07 | 93.22 |
| PGSC0003DMT400054474 | Potato | plastid | 46.15 | 65.14 |
| Solyc02g069510.1.1 | Tomato | nucleus | 46.15 | 62.98 |
| KRH42865 | Soybean | plastid | 42.51 | 62.87 |
| KRG92413 | Soybean | nucleus | 48.18 | 61.98 |
| KRH34151 | Soybean | plastid | 43.72 | 61.36 |
| KRH25774 | Soybean | nucleus | 42.91 | 59.89 |
| Os02t0166800-01 | Rice | nucleus | 45.75 | 59.16 |
| KRH34391 | Soybean | nucleus | 48.18 | 58.91 |
| KRH67397 | Soybean | nucleus | 48.18 | 58.62 |
| KRG95674 | Soybean | nucleus | 48.18 | 58.62 |
| KRH21273 | Soybean | nucleus | 42.91 | 58.56 |
| KRH27046 | Soybean | nucleus | 41.3 | 58.29 |
| KRH27347 | Soybean | nucleus | 43.32 | 58.15 |
| KRH22284 | Soybean | nucleus | 37.65 | 58.12 |
| KRH55744 | Soybean | nucleus | 42.11 | 58.1 |
| KRH11015 | Soybean | nucleus | 42.51 | 58.01 |
| KRG97044 | Soybean | plastid | 42.91 | 57.92 |
| KRG92633 | Soybean | nucleus | 44.53 | 57.89 |
| KRH32192 | Soybean | nucleus | 47.37 | 56.52 |
| KRH21973 | Soybean | nucleus | 44.13 | 56.19 |
| KRH68792 | Soybean | plastid | 41.7 | 55.98 |
| KRH56293 | Soybean | nucleus | 46.96 | 54.98 |
| KRH72732 | Soybean | nucleus | 48.58 | 54.79 |
| GSMUA_Achr4P31900_001 | Banana | nucleus | 41.7 | 54.79 |
| KRH17088 | Soybean | nucleus | 48.18 | 54.59 |
| GSMUA_Achr9P30540_001 | Banana | nucleus | 39.68 | 52.97 |
| GSMUA_Achr5P00260_001 | Banana | nucleus | 42.91 | 51.96 |
| KRG98226 | Soybean | nucleus | 48.18 | 51.29 |
| KRH30185 | Soybean | nucleus | 48.18 | 50.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 41.7 | 49.52 |
| Zm00001d015342_P001 | Maize | nucleus | 48.58 | 48.58 |
| GSMUA_Achr11P... | Banana | nucleus | 42.51 | 47.3 |
| EES04579 | Sorghum | nucleus | 48.99 | 46.9 |
| TraesCS6B01G168300.1 | Wheat | nucleus, plastid | 48.99 | 46.54 |
| TraesCS6D01G129400.1 | Wheat | nucleus | 48.58 | 46.33 |
| TraesCS6A01G139700.1 | Wheat | nucleus | 48.58 | 46.33 |
| TraesCS7B01G367400.1 | Wheat | nucleus | 48.99 | 45.15 |
| TraesCS7A01G466000.1 | Wheat | nucleus | 48.58 | 44.78 |
| HORVU7Hr1G106960.2 | Barley | nucleus | 48.58 | 44.61 |
| Zm00001d046998_P001 | Maize | nucleus | 49.8 | 44.4 |
| Os06t0672400-01 | Rice | nucleus | 49.8 | 44.4 |
| TraesCS7D01G453600.1 | Wheat | nucleus | 48.18 | 44.4 |
| Zm00001d036617_P001 | Maize | nucleus | 48.58 | 43.32 |
| KXG34092 | Sorghum | nucleus | 48.99 | 42.91 |
| OQU76862 | Sorghum | nucleus | 48.99 | 42.91 |
| HORVU2Hr1G060890.2 | Barley | nucleus, plastid | 42.11 | 40.0 |
| Zm00001d018775_P001 | Maize | nucleus | 41.3 | 39.84 |
| TraesCS2A01G254700.1 | Wheat | nucleus | 41.7 | 39.62 |
| TraesCS2B01G267400.1 | Wheat | nucleus | 40.89 | 39.3 |
| TraesCS2D01G255200.1 | Wheat | nucleus | 40.89 | 38.85 |
| Os07t0139300-01 | Rice | nucleus | 41.7 | 37.32 |
| EER97956 | Sorghum | mitochondrion, nucleus | 42.11 | 36.62 |
| Os08t0248000-00 | Rice | nucleus | 27.53 | 33.66 |
Protein Annotations
| EntrezGene:100798406 | MapMan:35.1 | EMBL:ACUP02004794 | InterPro:ALOG_dom | EnsemblPlantsGene:GLYMA_08G078500 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009299 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009987 | UniProt:I1KR95 |
| InterPro:IPR006936 | EnsemblPlants:KRH42251 | ProteinID:KRH42251 | ProteinID:KRH42251.1 | PFAM:PF04852 | PFscan:PS51697 |
| PANTHER:PTHR31165 | PANTHER:PTHR31165:SF36 | UniParc:UPI00023386D0 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr8:+:5980250..5982359
Molecular Weight (calculated)
26900.4 Da
IEP (calculated)
9.176
GRAVY (calculated)
-0.652
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAAVAASAA AATMSGYHHN SSSRQQQHID HELALTPQRV CVSPPLSRYE SQKRRDWNTF GQYLKNHRPP LTLSRCSGAH VLEFLRYLDQ FGKTKVHAET
101: CGYFGNSHPP GPCACPLRQA WGSLDALIGR LRAAFEENGG APEMNPFGTR AVRLYLREVR DAQAKARGIA YEKKKRRKPQ QSGHDHDHDA MMMVGSTSDV
201: NYSSGYSGGG GGAFVPHQQM LSDSNGTAST SDGVSYFSSS SQCGGFN
101: CGYFGNSHPP GPCACPLRQA WGSLDALIGR LRAAFEENGG APEMNPFGTR AVRLYLREVR DAQAKARGIA YEKKKRRKPQ QSGHDHDHDA MMMVGSTSDV
201: NYSSGYSGGG GGAFVPHQQM LSDSNGTAST SDGVSYFSSS SQCGGFN
001: MDMIPQLMEG SSAYGGVTNL NIISNNSSSV TGATGGEATQ PLSSSSSPSA NSSRYENQKR RDWNTFGQYL RNHRPPLSLS RCSGAHVLEF LRYLDQFGKT
101: KVHTNICHFY GHPNPPAPCP CPLRQAWGSL DALIGRLRAA FEENGGKPET NPFGARAVRL YLREVRDMQS KARGVSYEKK KRKRPLPSSS TSSSSAVASH
201: QQFQMLPGTS STTQLKFEK
101: KVHTNICHFY GHPNPPAPCP CPLRQAWGSL DALIGRLRAA FEENGGKPET NPFGARAVRL YLREVRDMQS KARGVSYEKK KRKRPLPSSS TSSSSAVASH
201: QQFQMLPGTS STTQLKFEK
Arabidopsis Description
LSH3Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 [Source:UniProtKB/Swiss-Prot;Acc:O82268]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.