Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30185 | Soybean | nucleus | 77.16 | 76.17 |
| VIT_06s0004g07090.t01 | Wine grape | nucleus | 69.83 | 70.13 |
| KRH17088 | Soybean | nucleus | 65.09 | 69.27 |
| KRH72732 | Soybean | nucleus | 64.66 | 68.49 |
| CDY32697 | Canola | nucleus | 51.72 | 67.8 |
| AT5G58500.1 | Thale cress | nucleus | 53.02 | 67.58 |
| Bra020365.1-P | Field mustard | nucleus | 52.59 | 67.4 |
| CDY59510 | Canola | nucleus | 52.59 | 67.4 |
| KRH34151 | Soybean | plastid | 50.86 | 67.05 |
| Solyc06g082210.1.1 | Tomato | nucleus | 63.79 | 66.67 |
| PGSC0003DMT400078091 | Potato | nucleus | 62.93 | 65.47 |
| CDY61050 | Canola | nucleus | 51.29 | 65.03 |
| OQU83235 | Sorghum | cytosol | 49.14 | 64.77 |
| CDY32977 | Canola | nucleus, plastid | 50.86 | 64.48 |
| Bra002642.1-P | Field mustard | nucleus, plastid | 50.43 | 63.93 |
| KRG92413 | Soybean | nucleus | 52.16 | 63.02 |
| KRH42865 | Soybean | plastid | 44.83 | 62.28 |
| KRG92633 | Soybean | nucleus | 50.86 | 62.11 |
| KRG97044 | Soybean | plastid | 48.28 | 61.2 |
| KRH68792 | Soybean | plastid | 47.41 | 59.78 |
| KRH34391 | Soybean | nucleus | 51.29 | 58.91 |
| KRH21273 | Soybean | nucleus | 45.69 | 58.56 |
| KRH32192 | Soybean | nucleus | 52.16 | 58.45 |
| KRG95674 | Soybean | nucleus | 50.86 | 58.13 |
| KRH67397 | Soybean | nucleus | 50.86 | 58.13 |
| KRH11015 | Soybean | nucleus | 45.26 | 58.01 |
| KRH27046 | Soybean | nucleus | 43.53 | 57.71 |
| KRH56293 | Soybean | nucleus | 51.72 | 56.87 |
| Bra002644.1-P | Field mustard | cytosol, nucleus, plastid | 45.69 | 56.68 |
| KRH25774 | Soybean | nucleus | 43.1 | 56.5 |
| KRH55744 | Soybean | nucleus | 43.1 | 55.87 |
| KRH27347 | Soybean | nucleus | 43.97 | 55.43 |
| CDY32978 | Canola | cytosol, nucleus, plastid | 44.4 | 55.08 |
| KRH22284 | Soybean | nucleus | 37.5 | 54.38 |
| KRH21973 | Soybean | nucleus | 43.97 | 52.58 |
| GSMUA_Achr6P08720_001 | Banana | nucleus | 43.97 | 51.78 |
| GSMUA_Achr7P18300_001 | Banana | nucleus | 44.83 | 50.49 |
| TraesCS1B01G235800.1 | Wheat | nucleus | 61.21 | 50.18 |
| HORVU1Hr1G060250.1 | Barley | nucleus | 61.64 | 50.0 |
| TraesCS1A01G222500.1 | Wheat | nucleus | 61.21 | 50.0 |
| TraesCS1D01G224100.1 | Wheat | nucleus | 61.21 | 50.0 |
| KRH58368 | Soybean | nucleus | 50.43 | 49.58 |
| Os05t0347400-01 | Rice | nucleus | 59.05 | 48.24 |
| KRH42251 | Soybean | plastid | 51.29 | 48.18 |
| Zm00001d038016_P001 | Maize | extracellular | 59.05 | 45.51 |
| Zm00001d010507_P001 | Maize | nucleus, plastid | 59.91 | 43.99 |
| EES19345 | Sorghum | nucleus, plastid | 60.78 | 43.38 |
Protein Annotations
| MapMan:35.1 | EMBL:ACUP02010851 | InterPro:ALOG_dom | EnsemblPlantsGene:GLYMA_18G058600 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009299 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009987 | UniProt:I1MZW0 | InterPro:IPR006936 |
| EnsemblPlants:KRG98226 | ProteinID:KRG98226 | ProteinID:KRG98226.1 | PFAM:PF04852 | PFscan:PS51697 | PANTHER:PTHR31165 |
| PANTHER:PTHR31165:SF6 | UniParc:UPI000296B053 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:5163076..5166750
Molecular Weight (calculated)
23974.1 Da
IEP (calculated)
9.908
GRAVY (calculated)
-0.514
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MASASGEAPP PQPTSTEAAP ASGSSAPAIS AAAPQPGGSS PAPPSRYESQ KRRDWNTFLQ YLQNHKPPLT LARCSGAHVI EFLKYLDQFG KTKVHITGCP
101: YYGYPNPPAP CACPLKQAWG SLDALIGRLR AAYEENGGRP ESNPFGARAV RIYLREVREG QAKARGIPYE KKKRKRTTVV MVSSGGGGSS GAVASPSGGG
201: DTAIGGGAGS SASLTSSATA TANDTTTTYM GQ
101: YYGYPNPPAP CACPLKQAWG SLDALIGRLR AAYEENGGRP ESNPFGARAV RIYLREVREG QAKARGIPYE KKKRKRTTVV MVSSGGGGSS GAVASPSGGG
201: DTAIGGGAGS SASLTSSATA TANDTTTTYM GQ
001: MESADSGRSD PVKGDDPGPS FVSSPPATPS RYESQKRRDW NTFLQYLKNH KPPLALSRCS GAHVIEFLKY LDQFGKTKVH VAACPYFGHQ QPPSPCSCPL
101: KQAWGSLDAL IGRLRAAYEE NGGRPDSNPF AARAVRIYLR EVRESQAKAR GIPYEKKKRK RPPTVTTVRV DVASSRQSDG DPCNVGAPSV AEAVPP
101: KQAWGSLDAL IGRLRAAYEE NGGRPDSNPF AARAVRIYLR EVRESQAKAR GIPYEKKKRK RPPTVTTVRV DVASSRQSDG DPCNVGAPSV AEAVPP
Arabidopsis Description
LSH6LSH6 [Source:UniProtKB/TrEMBL;Acc:A0A178WE41]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.