Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27347 | Soybean | nucleus | 91.24 | 96.2 |
| KRH27046 | Soybean | nucleus | 68.04 | 75.43 |
| KRH42865 | Soybean | plastid | 63.4 | 73.65 |
| KRH22284 | Soybean | nucleus | 59.79 | 72.5 |
| KRH25774 | Soybean | nucleus | 65.98 | 72.32 |
| KRH55744 | Soybean | nucleus | 66.49 | 72.07 |
| KRH21273 | Soybean | nucleus | 64.43 | 69.06 |
| Solyc07g062470.2.1 | Tomato | nucleus | 52.06 | 68.71 |
| KRH11015 | Soybean | nucleus | 63.92 | 68.51 |
| PGSC0003DMT400018295 | Potato | nucleus | 64.95 | 65.97 |
| PGSC0003DMT400054899 | Potato | nucleus | 70.1 | 65.7 |
| VIT_19s0014g01350.t01 | Wine grape | nucleus | 72.16 | 63.64 |
| Solyc10g007310.1.1 | Tomato | plastid | 69.59 | 63.38 |
| AT1G16910.1 | Thale cress | cytosol | 53.09 | 62.8 |
| CDX88480 | Canola | nucleus | 58.76 | 61.62 |
| Bra035066.1-P | Field mustard | nucleus | 59.79 | 61.05 |
| CDX87432 | Canola | nucleus | 59.79 | 61.05 |
| CDY14588 | Canola | nucleus | 57.73 | 58.95 |
| CDY26881 | Canola | nucleus | 57.73 | 58.64 |
| AT1G78815.1 | Thale cress | nucleus | 58.76 | 58.46 |
| Bra008382.1-P | Field mustard | nucleus | 57.22 | 58.12 |
| KRH34151 | Soybean | plastid | 52.58 | 57.95 |
| KRG92413 | Soybean | nucleus | 55.67 | 56.25 |
| KRG97044 | Soybean | plastid | 52.58 | 55.74 |
| KRH68792 | Soybean | plastid | 51.03 | 53.8 |
| KRG92633 | Soybean | nucleus | 52.58 | 53.68 |
| KRH34391 | Soybean | nucleus | 55.67 | 53.47 |
| KRH67397 | Soybean | nucleus | 53.61 | 51.23 |
| KRG95674 | Soybean | nucleus | 53.61 | 51.23 |
| KRH32192 | Soybean | nucleus | 52.58 | 49.28 |
| Bra003637.1-P | Field mustard | nucleus | 40.21 | 48.75 |
| KRH56293 | Soybean | nucleus | 52.58 | 48.34 |
| KRH17088 | Soybean | nucleus | 52.06 | 46.33 |
| KRH58368 | Soybean | nucleus | 55.67 | 45.76 |
| KRH72732 | Soybean | nucleus | 51.55 | 45.66 |
| KRH30185 | Soybean | nucleus | 53.61 | 44.26 |
| KRH42251 | Soybean | plastid | 56.19 | 44.13 |
| KRG98226 | Soybean | nucleus | 52.58 | 43.97 |
Protein Annotations
| MapMan:35.1 | EMBL:ACUP02008374 | InterPro:ALOG_dom | EnsemblPlantsGene:GLYMA_13G270300 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009299 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009987 | UniProt:I1M309 | InterPro:IPR006936 |
| EnsemblPlants:KRH21973 | ProteinID:KRH21973 | ProteinID:KRH21973.1 | PFAM:PF04852 | PFscan:PS51697 | PANTHER:PTHR31165 |
| PANTHER:PTHR31165:SF9 | UniParc:UPI0001BA46FB | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:37230141..37232518
Molecular Weight (calculated)
21919.7 Da
IEP (calculated)
10.348
GRAVY (calculated)
-1.047
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSKGKEIAE GSSTTTTATR SSHGGDDHHH HHNQQQQQQQ QQLPLSRYES QKRRDWNTFG QYLRNQRPPV ALSQCSSNHV LEFLRYLDQF GKTKVHSQGC
101: LFFGQTEPPG PCTCPLRQAW GSLDALIGRL RAAYEENGGL PETNPFASGT IRVYLREVRD SQAKARGIPY KKKKKKRNVI RPNGDTSSSN LPMQ
101: LFFGQTEPPG PCTCPLRQAW GSLDALIGRL RAAYEENGGL PETNPFASGT IRVYLREVRD SQAKARGIPY KKKKKKRNVI RPNGDTSSSN LPMQ
001: MASHSNKGKG IAEGSSQPQS QPQPQPHQPQ SPPNPPALSR YESQKRRDWN TFCQYLRNQQ PPVHISQCGS NHILDFLQYL DQFGKTKVHI HGCVFFGQVE
101: PAGQCNCPLK QAWGSLDALI GRLRAAFEEN GGLPERNPFA GGGIRVFLRE VRDSQAKARG VPYKKRKKRK KRNPMKSHDG EDGTTGTSSS SNLAS
101: PAGQCNCPLK QAWGSLDALI GRLRAAFEEN GGLPERNPFA GGGIRVFLRE VRDSQAKARG VPYKKRKKRK KRNPMKSHDG EDGTTGTSSS SNLAS
Arabidopsis Description
LSH7Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVA0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.