Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH72732 | Soybean | nucleus | 91.74 | 91.32 |
| CDY32697 | Canola | nucleus | 54.59 | 67.23 |
| Bra020365.1-P | Field mustard | nucleus | 55.05 | 66.3 |
| CDY59510 | Canola | nucleus | 55.05 | 66.3 |
| AT5G58500.1 | Thale cress | nucleus | 54.59 | 65.38 |
| KRG98226 | Soybean | nucleus | 69.27 | 65.09 |
| KRH30185 | Soybean | nucleus | 69.72 | 64.68 |
| CDY32977 | Canola | nucleus, plastid | 54.13 | 64.48 |
| CDY61050 | Canola | nucleus | 53.67 | 63.93 |
| Bra002642.1-P | Field mustard | nucleus, plastid | 53.21 | 63.39 |
| KRH34151 | Soybean | plastid | 50.46 | 62.5 |
| Solyc06g082210.1.1 | Tomato | nucleus | 62.84 | 61.71 |
| KRG92413 | Soybean | nucleus | 54.13 | 61.46 |
| OQU83235 | Sorghum | cytosol | 49.54 | 61.36 |
| KRG97044 | Soybean | plastid | 50.92 | 60.66 |
| PGSC0003DMT400078091 | Potato | nucleus | 61.93 | 60.54 |
| KRH42865 | Soybean | plastid | 46.33 | 60.48 |
| Bra002644.1-P | Field mustard | cytosol, nucleus, plastid | 51.38 | 59.89 |
| KRH68792 | Soybean | plastid | 49.54 | 58.7 |
| CDY32978 | Canola | cytosol, nucleus, plastid | 50.0 | 58.29 |
| KRH21273 | Soybean | nucleus | 48.17 | 58.01 |
| KRG92633 | Soybean | nucleus | 50.46 | 57.89 |
| KRH11015 | Soybean | nucleus | 47.71 | 57.46 |
| KRH34391 | Soybean | nucleus | 52.75 | 56.93 |
| KRH27046 | Soybean | nucleus | 44.95 | 56.0 |
| KRG95674 | Soybean | nucleus | 51.38 | 55.17 |
| KRH67397 | Soybean | nucleus | 51.38 | 55.17 |
| KRH27347 | Soybean | nucleus | 46.33 | 54.89 |
| KRH32192 | Soybean | nucleus | 51.83 | 54.59 |
| KRH22284 | Soybean | nucleus | 39.91 | 54.38 |
| KRH25774 | Soybean | nucleus | 44.04 | 54.24 |
| KRH55744 | Soybean | nucleus | 44.04 | 53.63 |
| KRH56293 | Soybean | nucleus | 51.38 | 53.08 |
| KRH21973 | Soybean | nucleus | 46.33 | 52.06 |
| GSMUA_Achr6P08720_001 | Banana | nucleus | 45.41 | 50.25 |
| KRH58368 | Soybean | nucleus | 54.13 | 50.0 |
| TraesCS1B01G235800.1 | Wheat | nucleus | 62.84 | 48.41 |
| TraesCS1D01G224100.1 | Wheat | nucleus | 62.84 | 48.24 |
| TraesCS1A01G222500.1 | Wheat | nucleus | 62.84 | 48.24 |
| KRH42251 | Soybean | plastid | 54.59 | 48.18 |
| HORVU1Hr1G060250.1 | Barley | nucleus | 62.84 | 47.9 |
| GSMUA_Achr7P18300_001 | Banana | nucleus | 44.95 | 47.57 |
| Os05t0347400-01 | Rice | nucleus | 61.47 | 47.18 |
| Zm00001d038016_P001 | Maize | extracellular | 60.55 | 43.85 |
| Zm00001d010507_P001 | Maize | nucleus, plastid | 62.39 | 43.04 |
| EES19345 | Sorghum | nucleus, plastid | 63.76 | 42.77 |
Protein Annotations
| EntrezGene:100780494 | MapMan:35.1 | EMBL:ACUP02009043 | InterPro:ALOG_dom | EnsemblPlantsGene:GLYMA_14G197300 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009299 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009987 | UniProt:I1MBE8 |
| InterPro:IPR006936 | EnsemblPlants:KRH17088 | ProteinID:KRH17088 | ProteinID:KRH17088.1 | PFAM:PF04852 | PFscan:PS51697 |
| PANTHER:PTHR31165 | PANTHER:PTHR31165:SF6 | UniParc:UPI000233AE21 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr14:+:46239260..46240644
Molecular Weight (calculated)
23008.2 Da
IEP (calculated)
10.379
GRAVY (calculated)
-0.388
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAASGAAPA ALAAPQSEGS PAAPSRYESQ KRRDWNTFLQ YLRNHKPPLT LARCSGAHVI EFLKYLDQFG KTKVHILGCP YFGHPNPPAP CACPLKQAWG
101: SLDALIGRLR AAFEENGGRP ESNPFATRAV RIYLREIREG QAKARGIPYE KKKRKRTIVT TTVTAAATVM STITGSSPNN TITNGAGSST GNTTNGAGVS
201: EPSAAATATP NVTTAAAV
101: SLDALIGRLR AAFEENGGRP ESNPFATRAV RIYLREIREG QAKARGIPYE KKKRKRTIVT TTVTAAATVM STITGSSPNN TITNGAGSST GNTTNGAGVS
201: EPSAAATATP NVTTAAAV
001: MEGETAAKAA ASSSSSPSRY ESQKRRDWNT FLQYLRNHKP PLNLSRCSGA HVLEFLKYLD QFGKTKVHAT ACPFFGQPNP PSQCTCPLKQ AWGSLDALIG
101: RLRAAFEEIG GGLPESNPFA AKAVRIYLKE VRQTQAKARG IPYDKKKRKR PHTDTATPIA GDGDDAEGSG GAALVVTAAT TV
101: RLRAAFEEIG GGLPESNPFA AKAVRIYLKE VRQTQAKARG IPYDKKKRKR PHTDTATPIA GDGDDAEGSG GAALVVTAAT TV
Arabidopsis Description
LSH5LSH5 [Source:UniProtKB/TrEMBL;Acc:A0A178U8N9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.