Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32192 | Soybean | nucleus | 93.36 | 95.17 |
| GSMUA_Achr11P... | Banana | nucleus | 37.91 | 85.11 |
| VIT_07s0005g03530.t01 | Wine grape | nucleus | 72.04 | 83.06 |
| KRH67397 | Soybean | nucleus | 77.25 | 80.3 |
| KRG95674 | Soybean | nucleus | 77.25 | 80.3 |
| Solyc09g025280.1.1 | Tomato | nucleus | 64.93 | 80.12 |
| PGSC0003DMT400026698 | Potato | nucleus | 65.88 | 75.14 |
| KRG92413 | Soybean | nucleus | 65.88 | 72.4 |
| Zm00001d025863_P001 | Maize | nucleus | 56.4 | 70.83 |
| KRH34151 | Soybean | plastid | 58.29 | 69.89 |
| KRH34391 | Soybean | nucleus | 66.82 | 69.8 |
| PGSC0003DMT400051692 | Potato | nucleus | 67.77 | 68.75 |
| Solyc06g083860.2.1 | Tomato | nucleus | 69.67 | 67.43 |
| KRG92633 | Soybean | nucleus | 60.19 | 66.84 |
| Bra018263.1-P | Field mustard | nucleus | 67.77 | 66.51 |
| CDY10790 | Canola | nucleus | 67.77 | 66.51 |
| CDY24755 | Canola | nucleus, plastid | 67.77 | 66.51 |
| GSMUA_Achr5P18640_001 | Banana | nucleus | 54.03 | 66.28 |
| AT2G31160.1 | Thale cress | nucleus | 68.25 | 65.75 |
| GSMUA_Achr1P09270_001 | Banana | nucleus | 53.55 | 65.7 |
| Os04t0516200-01 | Rice | nucleus | 62.56 | 65.35 |
| GSMUA_Achr5P03870_001 | Banana | nucleus | 53.55 | 65.32 |
| CDY15426 | Canola | nucleus | 66.82 | 64.98 |
| CDY57087 | Canola | nucleus | 66.82 | 64.98 |
| CDY57088 | Canola | nucleus | 66.82 | 64.98 |
| Bra021707.1-P | Field mustard | nucleus | 66.82 | 64.98 |
| EES11114 | Sorghum | nucleus | 61.14 | 64.82 |
| Zm00001d003057_P001 | Maize | nucleus | 61.14 | 64.5 |
| HORVU2Hr1G089190.1 | Barley | nucleus | 60.66 | 64.32 |
| TraesCS2D01G378900.1 | Wheat | nucleus | 61.14 | 64.18 |
| TraesCS6B01G256500.1 | Wheat | nucleus | 60.66 | 64.0 |
| KRG97044 | Soybean | plastid | 55.45 | 63.93 |
| TraesCS6A01G225000.1 | Wheat | nucleus | 61.14 | 63.86 |
| TraesCS6D01G209700.1 | Wheat | nucleus | 61.14 | 63.86 |
| TraesCS2A01G382500.1 | Wheat | nucleus | 60.66 | 63.68 |
| HORVU6Hr1G058340.2 | Barley | nucleus | 61.14 | 63.24 |
| TraesCS2B01G399800.1 | Wheat | nucleus | 60.19 | 63.18 |
| GSMUA_Achr5P14570_001 | Banana | nucleus | 51.66 | 63.01 |
| GSMUA_Achr4P21940_001 | Banana | nucleus | 52.13 | 62.86 |
| Os10t0478000-01 | Rice | nucleus | 60.66 | 62.75 |
| Zm00001d017263_P001 | Maize | nucleus | 60.66 | 62.75 |
| KRH68792 | Soybean | plastid | 54.5 | 62.5 |
| Zm00001d051143_P001 | Maize | nucleus | 59.72 | 62.38 |
| KRH42865 | Soybean | plastid | 49.29 | 62.28 |
| TraesCS1B01G172100.1 | Wheat | nucleus | 60.66 | 62.14 |
| TraesCS1D01G153700.1 | Wheat | nucleus | 60.66 | 62.14 |
| KXG30661 | Sorghum | nucleus | 61.14 | 62.02 |
| Zm00001d014032_P001 | Maize | nucleus | 61.61 | 61.9 |
| Zm00001d032696_P001 | Maize | nucleus | 62.09 | 61.5 |
| Os02t0623400-00 | Rice | nucleus | 60.66 | 61.24 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.08 | 60.39 |
| GSMUA_Achr1P05650_001 | Banana | nucleus | 46.45 | 59.76 |
| GSMUA_Achr4P28760_001 | Banana | nucleus | 51.66 | 59.56 |
| KRH27046 | Soybean | nucleus | 49.29 | 59.43 |
| KRH25774 | Soybean | nucleus | 49.29 | 58.76 |
| KXG38327 | Sorghum | nucleus | 61.61 | 58.3 |
| KRH55744 | Soybean | nucleus | 49.29 | 58.1 |
| KRH21273 | Soybean | nucleus | 49.76 | 58.01 |
| KRH11015 | Soybean | nucleus | 49.29 | 57.46 |
| GSMUA_Achr6P36540_001 | Banana | nucleus | 43.6 | 57.14 |
| KRH22284 | Soybean | nucleus | 43.13 | 56.88 |
| KRH27347 | Soybean | nucleus | 48.82 | 55.98 |
| HORVU1Hr1G041240.5 | Barley | nucleus | 60.19 | 55.95 |
| Zm00001d051966_P001 | Maize | nucleus | 63.51 | 54.47 |
| Zm00001d018433_P001 | Maize | nucleus | 63.03 | 53.85 |
| EES05986 | Sorghum | nucleus | 63.98 | 53.78 |
| Os02t0811000-01 | Rice | nucleus | 62.56 | 53.23 |
| TraesCS6A01G377300.1 | Wheat | nucleus | 63.51 | 53.17 |
| TraesCS6B01G414700.1 | Wheat | nucleus | 63.51 | 53.17 |
| TraesCS6D01G361900.1 | Wheat | nucleus | 63.51 | 53.17 |
| TraesCS1A01G154900.1 | Wheat | nucleus | 60.66 | 53.11 |
| KRH21973 | Soybean | nucleus | 48.34 | 52.58 |
| KRG98226 | Soybean | nucleus | 56.87 | 51.72 |
| HORVU6Hr1G088790.1 | Barley | nucleus | 62.56 | 51.56 |
| KRH17088 | Soybean | nucleus | 53.08 | 51.38 |
| KRH72732 | Soybean | nucleus | 53.08 | 51.14 |
| KRH30185 | Soybean | nucleus | 55.45 | 49.79 |
| KRH58368 | Soybean | nucleus | 55.45 | 49.58 |
| KRH42251 | Soybean | plastid | 54.98 | 46.96 |
Protein Annotations
| EntrezGene:100527409 | MapMan:35.1 | EMBL:ACUP02004109 | InterPro:ALOG_dom | EMBL:BT092250 | UniProt:C6T489 |
| EnsemblPlantsGene:GLYMA_06G315400 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009299 | GO:GO:0009416 | GO:GO:0009628 |
| GO:GO:0009987 | InterPro:IPR006936 | EnsemblPlants:KRH56293 | ProteinID:KRH56293 | ProteinID:KRH56293.1 | PFAM:PF04852 |
| PFscan:PS51697 | PANTHER:PTHR31165 | PANTHER:PTHR31165:SF38 | UniParc:UPI0001B15812 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:+:50450360..50452206
Molecular Weight (calculated)
23680.0 Da
IEP (calculated)
10.289
GRAVY (calculated)
-0.889
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSIQEFMES CNTDITTTAT TTMNTSSNSL VASSNSPSAS STTSSRYENQ KRRDWNTFGQ YLKNHRPPLS LSRCSGANVL EFLRYLDQFG KTKVHTPICP
101: FYGHPNPPAP CPCPLRQAWG SLDALIGRLR AAFEENGGKP ETNPFGARAV RLYLREVREL QSKARGISYE KKKRKRPPPP PPPPPQQQQS LPLPHHHRHL
201: HHHLPPPGAT Q
101: FYGHPNPPAP CPCPLRQAWG SLDALIGRLR AAFEENGGKP ETNPFGARAV RLYLREVREL QSKARGISYE KKKRKRPPPP PPPPPQQQQS LPLPHHHRHL
201: HHHLPPPGAT Q
001: MESADSGRSD PVKGDDPGPS FVSSPPATPS RYESQKRRDW NTFLQYLKNH KPPLALSRCS GAHVIEFLKY LDQFGKTKVH VAACPYFGHQ QPPSPCSCPL
101: KQAWGSLDAL IGRLRAAYEE NGGRPDSNPF AARAVRIYLR EVRESQAKAR GIPYEKKKRK RPPTVTTVRV DVASSRQSDG DPCNVGAPSV AEAVPP
101: KQAWGSLDAL IGRLRAAYEE NGGRPDSNPF AARAVRIYLR EVRESQAKAR GIPYEKKKRK RPPTVTTVRV DVASSRQSDG DPCNVGAPSV AEAVPP
Arabidopsis Description
LSH6LSH6 [Source:UniProtKB/TrEMBL;Acc:A0A178WE41]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.