Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g025280.1.1 | Tomato | nucleus | 81.08 | 87.72 |
| GSMUA_Achr11P... | Banana | nucleus | 40.0 | 78.72 |
| VIT_07s0005g03530.t01 | Wine grape | nucleus | 75.14 | 75.96 |
| KRG95674 | Soybean | nucleus | 74.59 | 67.98 |
| KRH67397 | Soybean | nucleus | 74.59 | 67.98 |
| PGSC0003DMT400051692 | Potato | nucleus | 76.22 | 67.79 |
| KRH32192 | Soybean | nucleus | 75.68 | 67.63 |
| Zm00001d025863_P001 | Maize | nucleus | 61.08 | 67.26 |
| KRH56293 | Soybean | nucleus | 75.14 | 65.88 |
| PGSC0003DMT400044213 | Potato | mitochondrion | 71.35 | 65.02 |
| GSMUA_Achr5P18640_001 | Banana | nucleus | 57.3 | 61.63 |
| CDY10790 | Canola | nucleus | 71.35 | 61.4 |
| Bra018263.1-P | Field mustard | nucleus | 71.35 | 61.4 |
| CDY24755 | Canola | nucleus, plastid | 70.81 | 60.93 |
| CDY57088 | Canola | nucleus | 71.35 | 60.83 |
| CDY57087 | Canola | nucleus | 71.35 | 60.83 |
| CDY15426 | Canola | nucleus | 71.35 | 60.83 |
| Bra021707.1-P | Field mustard | nucleus | 71.35 | 60.83 |
| EES11114 | Sorghum | nucleus | 65.41 | 60.8 |
| AT2G31160.1 | Thale cress | nucleus | 71.89 | 60.73 |
| GSMUA_Achr5P03870_001 | Banana | nucleus | 56.76 | 60.69 |
| Zm00001d003057_P001 | Maize | nucleus | 65.41 | 60.5 |
| PGSC0003DMT400054474 | Potato | plastid | 56.76 | 60.0 |
| Os04t0516200-01 | Rice | nucleus | 65.41 | 59.9 |
| GSMUA_Achr1P09270_001 | Banana | nucleus | 55.68 | 59.88 |
| GSMUA_Achr5P14570_001 | Banana | nucleus | 55.68 | 59.54 |
| TraesCS6B01G256500.1 | Wheat | nucleus | 64.32 | 59.5 |
| Zm00001d051143_P001 | Maize | nucleus | 64.86 | 59.41 |
| HORVU2Hr1G089190.1 | Barley | nucleus | 63.78 | 59.3 |
| TraesCS2A01G382500.1 | Wheat | nucleus | 64.32 | 59.2 |
| TraesCS2D01G378900.1 | Wheat | nucleus | 64.32 | 59.2 |
| TraesCS6A01G225000.1 | Wheat | nucleus | 64.32 | 58.91 |
| TraesCS6D01G209700.1 | Wheat | nucleus | 64.32 | 58.91 |
| TraesCS2B01G399800.1 | Wheat | nucleus | 63.78 | 58.71 |
| HORVU6Hr1G058340.2 | Barley | nucleus | 64.32 | 58.33 |
| Zm00001d017263_P001 | Maize | nucleus | 64.32 | 58.33 |
| GSMUA_Achr4P21940_001 | Banana | nucleus | 55.14 | 58.29 |
| KXG30661 | Sorghum | nucleus | 65.41 | 58.17 |
| Zm00001d014032_P001 | Maize | nucleus | 65.95 | 58.1 |
| TraesCS1D01G153700.1 | Wheat | nucleus | 64.32 | 57.77 |
| TraesCS1B01G172100.1 | Wheat | nucleus | 64.32 | 57.77 |
| Os10t0478000-01 | Rice | nucleus | 63.24 | 57.35 |
| PGSC0003DMT400052658 | Potato | nucleus | 53.51 | 57.23 |
| PGSC0003DMT400029945 | Potato | nucleus | 56.22 | 56.83 |
| Zm00001d032696_P001 | Maize | nucleus | 65.41 | 56.81 |
| Os02t0623400-00 | Rice | nucleus | 63.24 | 55.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.49 | 55.84 |
| PGSC0003DMT400027334 | Potato | nucleus | 53.51 | 55.62 |
| PGSC0003DMT400060169 | Potato | nucleus, plastid | 62.7 | 55.5 |
| GSMUA_Achr1P05650_001 | Banana | nucleus | 48.65 | 54.88 |
| KXG38327 | Sorghum | nucleus | 65.95 | 54.71 |
| GSMUA_Achr4P28760_001 | Banana | nucleus | 54.05 | 54.64 |
| PGSC0003DMT400026433 | Potato | nucleus | 55.14 | 53.4 |
| GSMUA_Achr6P36540_001 | Banana | nucleus | 45.95 | 52.8 |
| HORVU1Hr1G041240.5 | Barley | nucleus | 64.32 | 52.42 |
| Zm00001d018433_P001 | Maize | nucleus | 69.73 | 52.23 |
| Zm00001d051966_P001 | Maize | nucleus | 69.19 | 52.03 |
| EES05986 | Sorghum | nucleus | 70.27 | 51.79 |
| PGSC0003DMT400039811 | Potato | nucleus | 57.3 | 51.71 |
| Os02t0811000-01 | Rice | nucleus | 68.65 | 51.21 |
| TraesCS6B01G414700.1 | Wheat | nucleus | 69.73 | 51.19 |
| TraesCS6D01G361900.1 | Wheat | nucleus | 69.73 | 51.19 |
| TraesCS6A01G377300.1 | Wheat | nucleus | 69.73 | 51.19 |
| PGSC0003DMT400018295 | Potato | nucleus | 52.43 | 50.79 |
| HORVU6Hr1G088790.1 | Barley | nucleus | 69.19 | 50.0 |
| TraesCS1A01G154900.1 | Wheat | nucleus | 64.32 | 49.38 |
| PGSC0003DMT400078091 | Potato | nucleus | 59.46 | 49.33 |
| PGSC0003DMT400054899 | Potato | nucleus | 55.14 | 49.28 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400026698 | EnsemblPlantsGene:PGSC0003DMG400010316 | EntrezGene:102596568 | InterPro:ALOG_dom | InterPro:IPR006936 | PANTHER:PTHR31165 |
| PANTHER:PTHR31165:SF36 | PFAM:PF04852 | PFscan:PS51697 | PGSC:PGSC0003DMG400010316 | RefSeq:XP_006351667.1 | SEG:seg |
| UniParc:UPI0002958DEA | UniProt:M1ANL4 | MapMan:35.1 | : | : | : |
Description
G1-like6 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400010316]
Coordinates
chr9:-:50078122..50079254
Molecular Weight (calculated)
20661.4 Da
IEP (calculated)
10.560
GRAVY (calculated)
-0.802
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSFAEVESS NTINNNNNNN IMSSSSSRYG NQKRRDWNTF GQYLKNHRPP LSLSRCSGAH VLEFLRYLDQ FGKTKIHTPI CPFYGLPNPP APCPCPLRQA
101: WGSLDALIGR LRAAYEENGG KSEMNPFGAR AVRLYLREVR DLQSKARGVS YEKKKRKRPP SLQFSGVTSP SGSGGNNRSN ITHGV
101: WGSLDALIGR LRAAYEENGG KSEMNPFGAR AVRLYLREVR DLQSKARGVS YEKKKRKRPP SLQFSGVTSP SGSGGNNRSN ITHGV
001: MESADSGRSD PVKGDDPGPS FVSSPPATPS RYESQKRRDW NTFLQYLKNH KPPLALSRCS GAHVIEFLKY LDQFGKTKVH VAACPYFGHQ QPPSPCSCPL
101: KQAWGSLDAL IGRLRAAYEE NGGRPDSNPF AARAVRIYLR EVRESQAKAR GIPYEKKKRK RPPTVTTVRV DVASSRQSDG DPCNVGAPSV AEAVPP
101: KQAWGSLDAL IGRLRAAYEE NGGRPDSNPF AARAVRIYLR EVRESQAKAR GIPYEKKKRK RPPTVTTVRV DVASSRQSDG DPCNVGAPSV AEAVPP
Arabidopsis Description
LSH6LSH6 [Source:UniProtKB/TrEMBL;Acc:A0A178WE41]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.